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The map label for this gene is dgoA [H]

Identifier: 110633203

GI number: 110633203

Start: 940691

End: 941323

Strand: Direct

Name: dgoA [H]

Synonym: Meso_0846

Alternate gene names: 110633203

Gene position: 940691-941323 (Clockwise)

Preceding gene: 110633202

Following gene: 110633205

Centisome position: 21.32

GC content: 64.45

Gene sequence:

>633_bases
ATGAACAGGATAGCTTGGCCAAACCTCGAGCGAGATCTCATCGCCATTCTGCGCGGGCTGAAACCGAAGGAGGCGGAAGG
CATTGTCGGAGCGCTGATTGAGGCAGGCTTCGAGGCGATCGAGGTGCCGTTGAATTCGCCAGAGCCGTTCCGCTCCATCG
AAATTGCCCGGCGGCTCGCACCTGGGAATGTGCTGATCGGCGCTGGCACGGTACTCACGCTCGAGGATGCCGACCGGCTC
CGGGATGCGGGCGGCAATCTGCTCGTGAGCCCCAATGTGGAGCCTTCCGTCATCGAGCGCGCTTCCAGCCATGGCATGGT
CACCATGCCTGGCGTCTTTACCCCCACAGAGGCATTGGCCGCAGCCCGCGCAGGCGCTTCGGCGCTGAAATTTTTCCCCG
CCTCGGTGCTCGGGCCGGGCGGCATCAAGGCCATTCAGGCCGTCCTGCCGCCCGATATTAGGGTCGGCGCGGTGGGCGGC
GTCTCGGAATCTGATTTCGCCGCCTATAAGGCGGTGGGCGTGCGCACCTTTGGCCTGGGTTCCAGCCTTTATAAGCCCGG
CTCGCTGCCGGAAGATGTGGCGAAGAAAGCGCGAGCCGTGGTGGCGGCCTACGAGGCGGCTTTCGCGGGCTAA

Upstream 100 bases:

>100_bases
CGATCGCCCGCTTGAAATACCGTATGCTGGATGGACTGGAGCTGGTGCGCCGGGGGCTTCATGGCGCGGCGCTCGCAATC
TGGCCGGAAAGGAAAGCCGC

Downstream 100 bases:

>100_bases
TCTCTTTCGCCATCCTCGAAACCGGCGTGGAAGAAATCTTCGATTTCCTCCATCGTCACGCTTCCATCGCCATCCTGGTC
CACCGCATTGAAGATGCGGC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNRIAWPNLERDLIAILRGLKPKEAEGIVGALIEAGFEAIEVPLNSPEPFRSIEIARRLAPGNVLIGAGTVLTLEDADRL
RDAGGNLLVSPNVEPSVIERASSHGMVTMPGVFTPTEALAAARAGASALKFFPASVLGPGGIKAIQAVLPPDIRVGAVGG
VSESDFAAYKAVGVRTFGLGSSLYKPGSLPEDVAKKARAVVAAYEAAFAG

Sequences:

>Translated_210_residues
MNRIAWPNLERDLIAILRGLKPKEAEGIVGALIEAGFEAIEVPLNSPEPFRSIEIARRLAPGNVLIGAGTVLTLEDADRL
RDAGGNLLVSPNVEPSVIERASSHGMVTMPGVFTPTEALAAARAGASALKFFPASVLGPGGIKAIQAVLPPDIRVGAVGG
VSESDFAAYKAVGVRTFGLGSSLYKPGSLPEDVAKKARAVVAAYEAAFAG
>Mature_210_residues
MNRIAWPNLERDLIAILRGLKPKEAEGIVGALIEAGFEAIEVPLNSPEPFRSIEIARRLAPGNVLIGAGTVLTLEDADRL
RDAGGNLLVSPNVEPSVIERASSHGMVTMPGVFTPTEALAAARAGASALKFFPASVLGPGGIKAIQAVLPPDIRVGAVGG
VSESDFAAYKAVGVRTFGLGSSLYKPGSLPEDVAKKARAVVAAYEAAFAG

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=195, Percent_Identity=50.2564102564103, Blast_Score=170, Evalue=8e-44,
Organism=Escherichia coli, GI1788156, Length=144, Percent_Identity=29.1666666666667, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21652; Mature: 21652

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIAWPNLERDLIAILRGLKPKEAEGIVGALIEAGFEAIEVPLNSPEPFRSIEIARRLA
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCC
PGNVLIGAGTVLTLEDADRLRDAGGNLLVSPNVEPSVIERASSHGMVTMPGVFTPTEALA
CCCEEEECCEEEEECCHHHHHHCCCCEEECCCCCHHHHHHHCCCCEEEECCCCCHHHHHH
AARAGASALKFFPASVLGPGGIKAIQAVLPPDIRVGAVGGVSESDFAAYKAVGVRTFGLG
HHHCCHHHHHHCCHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHCEEEECCC
SSLYKPGSLPEDVAKKARAVVAAYEAAFAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRIAWPNLERDLIAILRGLKPKEAEGIVGALIEAGFEAIEVPLNSPEPFRSIEIARRLA
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCC
PGNVLIGAGTVLTLEDADRLRDAGGNLLVSPNVEPSVIERASSHGMVTMPGVFTPTEALA
CCCEEEECCEEEEECCHHHHHHCCCCEEECCCCCHHHHHHHCCCCEEEECCCCCHHHHHH
AARAGASALKFFPASVLGPGGIKAIQAVLPPDIRVGAVGGVSESDFAAYKAVGVRTFGLG
HHHCCHHHHHHCCHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHCEEEECCC
SSLYKPGSLPEDVAKKARAVVAAYEAAFAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]