| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633163
Identifier: 110633163
GI number: 110633163
Start: 894904
End: 895890
Strand: Direct
Name: 110633163
Synonym: Meso_0806
Alternate gene names: NA
Gene position: 894904-895890 (Clockwise)
Preceding gene: 110633162
Following gene: 110633164
Centisome position: 20.28
GC content: 58.76
Gene sequence:
>987_bases ATGCCTGAAGCTATTGAGATCAGATGTTTGAGAGCGGGGCTGAGGAGCGCCGCGATTGCCGCGGTCACTCTGGCGATGAC TACGGTCGCCCAGGCCGAGACCACGGTGCGGGTCGGCAAAGTCGGTACTGACTTTACCTTCTATCCGGCCGATTTCGGCA TGGAGAATGGGATTTTTCAGAAGCACGGCATCGAGCTGGATATCTACGAGATCGGCGGCGCCCAGATCGTTCAGACGATG GTCACGGGCAACGCGGATATCGGTCTGATGGGCGGCACGCAGCTGGCCTACATTGCCAATGGCGTGCCGATCAGCGCCGT CGGCGCGCTCTCCAACTCGCCCTATGGCTTCGTTCTGATTGCGCCCAGCGCCAGCGACGTTCATTCGGCTGCGGATCTGA AGGGTGGGACCATCTCGATCTCGCGTCCGAAATCCCTGACCGAATGGGTGGCGAGCAATGTTGCCATCAGTCAAGGCTGG CCGGTATCCGATCTGAGCTTCGTCGGTGTCGGCGGCGACGCCGAGCGTGTTGCGGCAACGGTGACCGGAGAGGCGGACGC AGCTCTCGTCAGCATCGAGGTTGCGCGACCGCTGGTGGAGAAGGGCGATATGAGGATCGTCGCCTCGTTCGGCGAACTGA TCCCGGACTTTCACAACCAGATCATCTTCGCGGCAAACGACTTTATCGAGAAGCAGCCCGAGGCGTTGCGAAGTTTCCTT ACTGCTTGGTACGAAACCGTTCAGTATATGAGGGACCACCGCGACGAGGTTGTCTCAGCCTATGCCAAAGACATGCAGAT CAGCGAAGAGGACGCAGCGTATGTCTATGACGCGCTCATGGCGACCGACTACATGTCGCTGGATGGCCGCTTCAATGAAA CCGCCATCAAGCTGATGGACGAGATGTTCGTCCAATACGGCCAGACGGAGAAGCCCTTTCCGAGCGATCAGTACACCAAC GAGCAATATCTCCCAAACGCGATGTAG
Upstream 100 bases:
>100_bases GAAGGGGCGGGGGAGGCCGCCCGGCCAGTACATCGGCAGACTTCTCATCGGCTCGCAGTGAAGATCGGGTTTCATTTTCG AATCCAAGGGAGGGATCAGA
Downstream 100 bases:
>100_bases ACTGCACGCACGTCGGGGTGAGGGCGCGGGCGCCCCTTGGTCCGCCCGCGCAAGCTTCGCGCAGAGAGGATGCATTATGG ATTGCACATCGGCACGGCCC
Product: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like
Products: NA
Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5-Like Domain-Containing Protein; Signal Peptide Protein
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPEAIEIRCLRAGLRSAAIAAVTLAMTTVAQAETTVRVGKVGTDFTFYPADFGMENGIFQKHGIELDIYEIGGAQIVQTM VTGNADIGLMGGTQLAYIANGVPISAVGALSNSPYGFVLIAPSASDVHSAADLKGGTISISRPKSLTEWVASNVAISQGW PVSDLSFVGVGGDAERVAATVTGEADAALVSIEVARPLVEKGDMRIVASFGELIPDFHNQIIFAANDFIEKQPEALRSFL TAWYETVQYMRDHRDEVVSAYAKDMQISEEDAAYVYDALMATDYMSLDGRFNETAIKLMDEMFVQYGQTEKPFPSDQYTN EQYLPNAM
Sequences:
>Translated_328_residues MPEAIEIRCLRAGLRSAAIAAVTLAMTTVAQAETTVRVGKVGTDFTFYPADFGMENGIFQKHGIELDIYEIGGAQIVQTM VTGNADIGLMGGTQLAYIANGVPISAVGALSNSPYGFVLIAPSASDVHSAADLKGGTISISRPKSLTEWVASNVAISQGW PVSDLSFVGVGGDAERVAATVTGEADAALVSIEVARPLVEKGDMRIVASFGELIPDFHNQIIFAANDFIEKQPEALRSFL TAWYETVQYMRDHRDEVVSAYAKDMQISEEDAAYVYDALMATDYMSLDGRFNETAIKLMDEMFVQYGQTEKPFPSDQYTN EQYLPNAM >Mature_327_residues PEAIEIRCLRAGLRSAAIAAVTLAMTTVAQAETTVRVGKVGTDFTFYPADFGMENGIFQKHGIELDIYEIGGAQIVQTMV TGNADIGLMGGTQLAYIANGVPISAVGALSNSPYGFVLIAPSASDVHSAADLKGGTISISRPKSLTEWVASNVAISQGWP VSDLSFVGVGGDAERVAATVTGEADAALVSIEVARPLVEKGDMRIVASFGELIPDFHNQIIFAANDFIEKQPEALRSFLT AWYETVQYMRDHRDEVVSAYAKDMQISEEDAAYVYDALMATDYMSLDGRFNETAIKLMDEMFVQYGQTEKPFPSDQYTNE QYLPNAM
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35460; Mature: 35329
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAIEIRCLRAGLRSAAIAAVTLAMTTVAQAETTVRVGKVGTDFTFYPADFGMENGIFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCCCH KHGIELDIYEIGGAQIVQTMVTGNADIGLMGGTQLAYIANGVPISAVGALSNSPYGFVLI HCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCEEEEEECCCCEEEEHHCCCCCCEEEEE APSASDVHSAADLKGGTISISRPKSLTEWVASNVAISQGWPVSDLSFVGVGGDAERVAAT CCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCEEECCCCCCCCCEEEECCCCHHHEEEE VTGEADAALVSIEVARPLVEKGDMRIVASFGELIPDFHNQIIFAANDFIEKQPEALRSFL EECCCCEEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHH TAWYETVQYMRDHRDEVVSAYAKDMQISEEDAAYVYDALMATDYMSLDGRFNETAIKLMD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH EMFVQYGQTEKPFPSDQYTNEQYLPNAM HHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PEAIEIRCLRAGLRSAAIAAVTLAMTTVAQAETTVRVGKVGTDFTFYPADFGMENGIFQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCCCH KHGIELDIYEIGGAQIVQTMVTGNADIGLMGGTQLAYIANGVPISAVGALSNSPYGFVLI HCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCEEEEEECCCCEEEEHHCCCCCCEEEEE APSASDVHSAADLKGGTISISRPKSLTEWVASNVAISQGWPVSDLSFVGVGGDAERVAAT CCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCEEECCCCCCCCCEEEECCCCHHHEEEE VTGEADAALVSIEVARPLVEKGDMRIVASFGELIPDFHNQIIFAANDFIEKQPEALRSFL EECCCCEEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHH TAWYETVQYMRDHRDEVVSAYAKDMQISEEDAAYVYDALMATDYMSLDGRFNETAIKLMD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH EMFVQYGQTEKPFPSDQYTNEQYLPNAM HHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA