| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is narP [H]
Identifier: 110633154
GI number: 110633154
Start: 886030
End: 886443
Strand: Reverse
Name: narP [H]
Synonym: Meso_0797
Alternate gene names: 110633154
Gene position: 886443-886030 (Counterclockwise)
Preceding gene: 110633155
Following gene: 110633153
Centisome position: 20.09
GC content: 55.31
Gene sequence:
>414_bases TTGGGGAAAATCATGAAACAAATATCAGTAGCCTGCGTGGACGATCATCCTGTCCTATTGGAGGGTCTGCAAAGTATAAT CTCCGAGGCCGGCAAATACAGGGTGGTAGCCAGCGGGAAAAACTCGTCGGACGCCGTCGAAATAGCGAATCGAGATCAGC CCCAAATTCTGATACTCGATCTGAATATGCCCGGAGACGTATTCGACGCGATCGGAGTTATACGTGAAGCGTCGCCGACG ACCCGCATCCTCGCCTTCACCGCTTCGGCCGCCATAGATCATGCTGTACGCGCGCTCGATGCCGGGGCAACGGGCTATGT GCTGAAAGGCAGCAGCGACGAGGAACTGTTGCAGGCCATTATGCCGTTGTCGCCGGGGAAACATTCATCACCCCTGGCTT TGCCAGCAAGGTGA
Upstream 100 bases:
>100_bases CTATAGGAGTAGAGCATCCTAACGATGCACGTCAACTAAACTTGATTCAGGAATTTACGAGCCGCCCCGATAACATTATT CTCTTTGTAATACAGAGGGG
Downstream 100 bases:
>100_bases TTGCTGCGCTTCGCAATGTTGCGGTGCAAGGATCAATGGCAAGAAAAGTCAATTTGAGCGTACGCGAGGATCAGATCGTT CGGCTTTTGCTGCTTGGCCG
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGKIMKQISVACVDDHPVLLEGLQSIISEAGKYRVVASGKNSSDAVEIANRDQPQILILDLNMPGDVFDAIGVIREASPT TRILAFTASAAIDHAVRALDAGATGYVLKGSSDEELLQAIMPLSPGKHSSPLALPAR
Sequences:
>Translated_137_residues MGKIMKQISVACVDDHPVLLEGLQSIISEAGKYRVVASGKNSSDAVEIANRDQPQILILDLNMPGDVFDAIGVIREASPT TRILAFTASAAIDHAVRALDAGATGYVLKGSSDEELLQAIMPLSPGKHSSPLALPAR >Mature_136_residues GKIMKQISVACVDDHPVLLEGLQSIISEAGKYRVVASGKNSSDAVEIANRDQPQILILDLNMPGDVFDAIGVIREASPTT RILAFTASAAIDHAVRALDAGATGYVLKGSSDEELLQAIMPLSPGKHSSPLALPAR
Specific function: Could activate the expression of a formate dehydrogenase operon and could repress the transcription of the fumarate reductase (frdABCD) operon [H]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788521, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1787473, Length=120, Percent_Identity=35.8333333333333, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 14390; Mature: 14259
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIMKQISVACVDDHPVLLEGLQSIISEAGKYRVVASGKNSSDAVEIANRDQPQILILD CCHHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEE LNMPGDVFDAIGVIREASPTTRILAFTASAAIDHAVRALDAGATGYVLKGSSDEELLQAI ECCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH MPLSPGKHSSPLALPAR HCCCCCCCCCCCCCCCC >Mature Secondary Structure GKIMKQISVACVDDHPVLLEGLQSIISEAGKYRVVASGKNSSDAVEIANRDQPQILILD CHHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEE LNMPGDVFDAIGVIREASPTTRILAFTASAAIDHAVRALDAGATGYVLKGSSDEELLQAI ECCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH MPLSPGKHSSPLALPAR HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]