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The map label for this gene is 110633058

Identifier: 110633058

GI number: 110633058

Start: 775722

End: 776507

Strand: Reverse

Name: 110633058

Synonym: Meso_0701

Alternate gene names: NA

Gene position: 776507-775722 (Counterclockwise)

Preceding gene: 110633060

Following gene: 110633050

Centisome position: 17.6

GC content: 60.31

Gene sequence:

>786_bases
ATGCCGATGAACGACAAAACAAACACCAAAATGAATCGCAGGGACAAGCTTCGCGAGGCCACCATGGCCGAGATCCGGCA
CATCGCTCGCGAGTTGCTGGTCAGCAATGGTGCCCAGGCAGTTACCGTCAACGCGGTTGCCCGGAAAATGGGTATGAGCG
GCCCGGCTCTTTACCGCTATTATTCCAGCCAAAACGAGCTGATCGAAGCGCTGCGGCTCGACCTCTATTCAGAGCTGGTC
AACACCCTCACATCTGCGCGGGAACGCAGCGGCGCAACCGACCCGGAATGCCGCCTCCTCGCCATCTGCAGGGCTTTGCG
CCAGTGGGCCGTCACCCATCCTGCCGAATTCGGCTGCCTTTTCGCCACGCCTGCGCCCATGGGTCTCGAGAGGTGCACCA
ATGCCAGCCAGTCCGGCCGGGCGTTCGGACAGGTTTTCCTGGAGGAGATCGTGGCCATCTGGCGCACGAAGCGGTTTCCA
ATACCGAGCCTGGAGGATATGGATCCCTCCCTGGCCGAGCAGTTGTGCAAATATTCCGAGAGAATTGACGGCGCGCTGCC
GCCCGAGGCCGCCTATATCTTTCTTTCCTGCTGGATGCGGCTTTACGGCCTGCTCTGCATGGAGGTTCTGAACCAGATCG
GCTTTGCCTACAGCGATCTGGAGCCCGTATACGAGGAATGCCTGCAGGACCTCTGCAGGCTCCTTGATATTCCCTATGAG
GAGCCAGTGCCTGCCGGACACGCTGGCACCATCAGAAAGGACAGGCTGCGCGAGGCGGGTCTCTAG

Upstream 100 bases:

>100_bases
TCTTTGAAGCCGACGCGCCCGTATCGGCAGCGCCGTCTTGCTTGCGATATTCACTAAAGTTAGATAATCTAACTAAAGTT
ATTTGCGCTAGCATGTCAAT

Downstream 100 bases:

>100_bases
GTGGTCGGCTGCTCCTTTGCGGAGGCTTAGCGCTCGACAGAATCGAAAACGCGGATCTTCAACCAAATCCGATTGGTCTC
CGGGATGAAGTGGTTCACAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPMNDKTNTKMNRRDKLREATMAEIRHIARELLVSNGAQAVTVNAVARKMGMSGPALYRYYSSQNELIEALRLDLYSELV
NTLTSARERSGATDPECRLLAICRALRQWAVTHPAEFGCLFATPAPMGLERCTNASQSGRAFGQVFLEEIVAIWRTKRFP
IPSLEDMDPSLAEQLCKYSERIDGALPPEAAYIFLSCWMRLYGLLCMEVLNQIGFAYSDLEPVYEECLQDLCRLLDIPYE
EPVPAGHAGTIRKDRLREAGL

Sequences:

>Translated_261_residues
MPMNDKTNTKMNRRDKLREATMAEIRHIARELLVSNGAQAVTVNAVARKMGMSGPALYRYYSSQNELIEALRLDLYSELV
NTLTSARERSGATDPECRLLAICRALRQWAVTHPAEFGCLFATPAPMGLERCTNASQSGRAFGQVFLEEIVAIWRTKRFP
IPSLEDMDPSLAEQLCKYSERIDGALPPEAAYIFLSCWMRLYGLLCMEVLNQIGFAYSDLEPVYEECLQDLCRLLDIPYE
EPVPAGHAGTIRKDRLREAGL
>Mature_260_residues
PMNDKTNTKMNRRDKLREATMAEIRHIARELLVSNGAQAVTVNAVARKMGMSGPALYRYYSSQNELIEALRLDLYSELVN
TLTSARERSGATDPECRLLAICRALRQWAVTHPAEFGCLFATPAPMGLERCTNASQSGRAFGQVFLEEIVAIWRTKRFPI
PSLEDMDPSLAEQLCKYSERIDGALPPEAAYIFLSCWMRLYGLLCMEVLNQIGFAYSDLEPVYEECLQDLCRLLDIPYEE
PVPAGHAGTIRKDRLREAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 29415; Mature: 29284

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMNDKTNTKMNRRDKLREATMAEIRHIARELLVSNGAQAVTVNAVARKMGMSGPALYRY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
YSSQNELIEALRLDLYSELVNTLTSARERSGATDPECRLLAICRALRQWAVTHPAEFGCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCEE
FATPAPMGLERCTNASQSGRAFGQVFLEEIVAIWRTKRFPIPSLEDMDPSLAEQLCKYSE
ECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
RIDGALPPEAAYIFLSCWMRLYGLLCMEVLNQIGFAYSDLEPVYEECLQDLCRLLDIPYE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
EPVPAGHAGTIRKDRLREAGL
CCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PMNDKTNTKMNRRDKLREATMAEIRHIARELLVSNGAQAVTVNAVARKMGMSGPALYRY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
YSSQNELIEALRLDLYSELVNTLTSARERSGATDPECRLLAICRALRQWAVTHPAEFGCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCEE
FATPAPMGLERCTNASQSGRAFGQVFLEEIVAIWRTKRFPIPSLEDMDPSLAEQLCKYSE
ECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
RIDGALPPEAAYIFLSCWMRLYGLLCMEVLNQIGFAYSDLEPVYEECLQDLCRLLDIPYE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
EPVPAGHAGTIRKDRLREAGL
CCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]