| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633001
Identifier: 110633001
GI number: 110633001
Start: 720786
End: 721952
Strand: Reverse
Name: 110633001
Synonym: Meso_0644
Alternate gene names: NA
Gene position: 721952-720786 (Counterclockwise)
Preceding gene: 110633002
Following gene: 110633000
Centisome position: 16.36
GC content: 61.87
Gene sequence:
>1167_bases ATGCGCGTCAGTTTCGCCGCTTCGCGGTATTTTGTGTGGTTACTGTTGCTGGTCGCCGCTGGCTGCGCGAACCCCGAAAA CCATCGCCTGATAGCGCGCACAACCGCGCCCGCGACCTCAGCCCAAATCGCCGGAGAATATAGCATCCTGGTTGCGACGA CGCGTGCGGAAACGACCGAACCCGGCGTCATTTTCTCCGGCGACCGCTCGCCGGCCACCACCTATGCCTTTGTCGATGTT TCGGTGCCGGCAGTCCACCAGACGGGCGAGCTTGAACGCTCCCCCTCTCCGCAGGTTGCCGATCCCGCGCGCTATTTTGC GGCGCGTCGGCTCGGGATCTATCGCGACGAACAGGCCTATGGCAAAGCCCTCCGACAAAGCATCGAAGCGCATGACGGCC GAGCACTCGTCTTCATCCACGGCTTCAATACCGGGTTTGACAACGCAGTCTACCGCATGACGCAGATTGCGCATGATGCC GGCTTCAAAGGGACGCTTATCCTTTTTTCCTGGCCCTCCGCCGCACGCATCGTCGACTATATCTACGACAACAACAGCGC CACCGCGAGCCGCGACGCTCTGGAGGATCTGCTGCGGCTCGTCGCCCGATCCGGCGCGCAGAGGATCAATGTCGTTGCCC ACTCCATGGGCGGCTGGGTGTCGATGGAGGCCCTGCGCCAGCTCGCCATGACCGACGACAAGGATCTTGGCGGGCGGCTC GCCGATGTGGTGCTTGCCTCGCCGGATATCGATGTGGACGTTTTCAAGAGCCAGATGCGCCGTTACGGTACGCCGGACCG TAGCTTCTTTATCTTCACATCCAGAAACGACCGGGCGCTGGACCTTTCAAAGATCATCGCAGGAAATCGTGCGCGCGTGG GCGGCGCAATCGATGCCGCCGAGCTCGCCAAATATGGCGTCATCGTCATCGACGTGACGGATGTCTCCTCTCCCGACCGC ATCAACCACACGAAATTCGCGGAGAACCCATTGCTGGTGCGGCTTTTGGGAGAGGGACTGGTGGACACGGAGGAGCCCGC CTCCGCCGACCAGCAACTTGTGCAGCGCATCAACTCGCTCGCCGGAAGCATCGGCCAAACGATCGGCGCGGCGGCAGACA TCGTTATCACCACTCCGCTCGACGTGCTCGAAGCAGTCGCGGATTGA
Upstream 100 bases:
>100_bases TTACAGCGGCAAAGCACAGCGGAATCGATCGGTCTCGTGTTCGCATGAAACAGCCGAATGGCTTATCGTCCGGGAGAACG AATCATCAGGCTGGGTGGGA
Downstream 100 bases:
>100_bases CCGGACAAGACGGCTGGAGAAAACAGGATTGATTTTCTCCACTATTCTCGGCTAGGCTGCCGCTGATTTTGCTCGCCTAG ATTGCTGAAGAGGATTTTTA
Product: protein of unknown function DUF900, hydrolase-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MRVSFAASRYFVWLLLLVAAGCANPENHRLIARTTAPATSAQIAGEYSILVATTRAETTEPGVIFSGDRSPATTYAFVDV SVPAVHQTGELERSPSPQVADPARYFAARRLGIYRDEQAYGKALRQSIEAHDGRALVFIHGFNTGFDNAVYRMTQIAHDA GFKGTLILFSWPSAARIVDYIYDNNSATASRDALEDLLRLVARSGAQRINVVAHSMGGWVSMEALRQLAMTDDKDLGGRL ADVVLASPDIDVDVFKSQMRRYGTPDRSFFIFTSRNDRALDLSKIIAGNRARVGGAIDAAELAKYGVIVIDVTDVSSPDR INHTKFAENPLLVRLLGEGLVDTEEPASADQQLVQRINSLAGSIGQTIGAAADIVITTPLDVLEAVAD
Sequences:
>Translated_388_residues MRVSFAASRYFVWLLLLVAAGCANPENHRLIARTTAPATSAQIAGEYSILVATTRAETTEPGVIFSGDRSPATTYAFVDV SVPAVHQTGELERSPSPQVADPARYFAARRLGIYRDEQAYGKALRQSIEAHDGRALVFIHGFNTGFDNAVYRMTQIAHDA GFKGTLILFSWPSAARIVDYIYDNNSATASRDALEDLLRLVARSGAQRINVVAHSMGGWVSMEALRQLAMTDDKDLGGRL ADVVLASPDIDVDVFKSQMRRYGTPDRSFFIFTSRNDRALDLSKIIAGNRARVGGAIDAAELAKYGVIVIDVTDVSSPDR INHTKFAENPLLVRLLGEGLVDTEEPASADQQLVQRINSLAGSIGQTIGAAADIVITTPLDVLEAVAD >Mature_388_residues MRVSFAASRYFVWLLLLVAAGCANPENHRLIARTTAPATSAQIAGEYSILVATTRAETTEPGVIFSGDRSPATTYAFVDV SVPAVHQTGELERSPSPQVADPARYFAARRLGIYRDEQAYGKALRQSIEAHDGRALVFIHGFNTGFDNAVYRMTQIAHDA GFKGTLILFSWPSAARIVDYIYDNNSATASRDALEDLLRLVARSGAQRINVVAHSMGGWVSMEALRQLAMTDDKDLGGRL ADVVLASPDIDVDVFKSQMRRYGTPDRSFFIFTSRNDRALDLSKIIAGNRARVGGAIDAAELAKYGVIVIDVTDVSSPDR INHTKFAENPLLVRLLGEGLVDTEEPASADQQLVQRINSLAGSIGQTIGAAADIVITTPLDVLEAVAD
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41970; Mature: 41970
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSFAASRYFVWLLLLVAAGCANPENHRLIARTTAPATSAQIAGEYSILVATTRAETTE CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCCEEEEEEEECCCCCC PGVIFSGDRSPATTYAFVDVSVPAVHQTGELERSPSPQVADPARYFAARRLGIYRDEQAY CCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH GKALRQSIEAHDGRALVFIHGFNTGFDNAVYRMTQIAHDAGFKGTLILFSWPSAARIVDY HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH IYDNNSATASRDALEDLLRLVARSGAQRINVVAHSMGGWVSMEALRQLAMTDDKDLGGRL EECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCEEHHHHHHHHHCCCCCCCCCHH ADVVLASPDIDVDVFKSQMRRYGTPDRSFFIFTSRNDRALDLSKIIAGNRARVGGAIDAA HHHEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHH ELAKYGVIVIDVTDVSSPDRINHTKFAENPLLVRLLGEGLVDTEEPASADQQLVQRINSL HHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH AGSIGQTIGAAADIVITTPLDVLEAVAD HHHHHHHHCCCCCEEEECCHHHHHHHCC >Mature Secondary Structure MRVSFAASRYFVWLLLLVAAGCANPENHRLIARTTAPATSAQIAGEYSILVATTRAETTE CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCCEEEEEEEECCCCCC PGVIFSGDRSPATTYAFVDVSVPAVHQTGELERSPSPQVADPARYFAARRLGIYRDEQAY CCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH GKALRQSIEAHDGRALVFIHGFNTGFDNAVYRMTQIAHDAGFKGTLILFSWPSAARIVDY HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH IYDNNSATASRDALEDLLRLVARSGAQRINVVAHSMGGWVSMEALRQLAMTDDKDLGGRL EECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCEEHHHHHHHHHCCCCCCCCCHH ADVVLASPDIDVDVFKSQMRRYGTPDRSFFIFTSRNDRALDLSKIIAGNRARVGGAIDAA HHHEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHH ELAKYGVIVIDVTDVSSPDRINHTKFAENPLLVRLLGEGLVDTEEPASADQQLVQRINSL HHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH AGSIGQTIGAAADIVITTPLDVLEAVAD HHHHHHHHCCCCCEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA