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The map label for this gene is 110632989

Identifier: 110632989

GI number: 110632989

Start: 707826

End: 709430

Strand: Reverse

Name: 110632989

Synonym: Meso_0632

Alternate gene names: NA

Gene position: 709430-707826 (Counterclockwise)

Preceding gene: 110632990

Following gene: 110632988

Centisome position: 16.08

GC content: 59.38

Gene sequence:

>1605_bases
ATGATCGAAGACCTGCGGGACACAGCTCCATATCCCGAGAAAACAGACGTCATTGTTGTCGGCGCAGGAGCTGTGGGAAT
CCCGCTTGCTGTCCAACTTGCGCGTGGAGGGAAACGCGTGCTGCTTCTGGAGGCCGGCGGCAGGGCAAAAACAGGCACAC
TCCAGGGCTTCGAAGGCACGACCTCGGTCGGTCGGCATCTGAGGGGATTGCAGGAGGCGCGCCTGCGATCGCTCGGCGGC
ACGACCAATGCCTGGGGCGGCCAGCTGCTCGAATTCGATCCGATCGTTTTCGAGCAGCGCGATTGGGTGGACGGAAGCCG
TTGGCCGATTACGAGGAGGGATCTGGATCCGTTCTACGAGCTCACCTTCGAAATGCTCGGAATGCGCGACCGCATCAAGA
ACACCGAAACTCTCTGGCAGAAGCTCAACGTTGCGCCGCCCGACACCGGGCGTGATCTGGACCTGTTTTTCACACGTTGG
ACGCCCGAACCCAATTTTTCACGGGTATTCCGGTCAGACCTGGCGACGAATCCAAACCTCCACGTGATGACAAATGCTCC
GGTCGTGGGCCTGTCGCGCCTCGAGAGCGGACGGCGCTTCGGTGTCACGGTCGCTCCGCGCCATGGAGATACCCTTTCCC
TCTCAGCCCGCCATGTTGTTCTTGCCCAGGGCACGATTGAAATAGCCAGATTGCTATCAATGCCGCTGACGAGCGGCGAA
ATAGCTCCCTGGACGGGTAATCCGTGGCTGGGAAAAGGTTTTTGCGACCATGTGGACGCCGATGTCGGCACCGTCAGGCT
GACCGATCCCGAGCGCTTTCATCAGATTTTCGATGGCGCATTGCTCCACGGCCACAAATATCTGCCTAAACTGAAGCTTT
CGAGTGAAGCTCAGAGACGCCGCAGGCTTTTGGGAATCGCGGGGCACTTCGTCTTTCAGTCGGGTCATGAGAACGGATTG
AAGGCCATCAAGGGCATTGTTCGCAGCCTGATGCAGGGACATCTCAACATGTCCGAGTTGCAGGATTGGCGCGCTCTGGC
CGCTATCCCAAAGGTCGCCATACCGGCCGCCATGCACTTGTTGCGAAATCATCGGATCTACAATCCTGGGGATGGCGGCA
TCACGCTTCGCGTCACCGGAGAACAAATGCCCCTGCGTGAGAGCGGATTGCGGTTGACTGGGAAAAACGATCCGCAGGGA
ATGCCCATCGCCGAAATTGATTGGCGTATCGACGGCCAACCTGAATTGGAAACGATCGCCACCTTCAGCAGCTTGGTGGC
TGACTTTCTGAAACGCGAAGGACTGGCGCAAGTCTCTCTTGATCCGCGGCTGACCGCGCGCGACCCCGGTTTCTTGAGCA
AGATCGAAGATGGCTTTCACCAGATGGGAATGGCCCGTATGGGCGCGTCCCCGAGCGATGGGGTCGTGGACAAGGACTTG
CGGGTGTTCGGCACCGACAATCTGTTTGTCGCCGGCGCCGCTGCATTCCGCCCTGCCGGCTTTCCCAACCCGACCCTCAC
CGCGATCGCACTGGCCCTGAGGCTAGGAGATTTTCTGCTGCGACAACCGGCTGGTCGCGACGCTTTCGCAGCACAAGCGG
GATAA

Upstream 100 bases:

>100_bases
TACAAATCGCAAGACTTAGCCATATTTTGTGAACGGCGCGAACGCAGCTTTAAGTATTAGGTTCATGAGCTTCCGATTCA
CTTAAGGCATCGGGCGGGGG

Downstream 100 bases:

>100_bases
TATAGGTTTGGAATTGGGTCTGCTGCTCAACCTGCATTCCTTGACTCATATATAGCTCATTGGTTATTGATCCAATCCAT
AGCCAATGAGTTATAAATCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; NAD-Dependent Epimerase/Dehydratase; GMC Oxidoreductase Family; Glucose-Methanol-Choline Oxidoreductase; Choline Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; GMC Family Oxidoreductase; Capsular Polysaccharide Biosynthesis Oxidoreductase

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MIEDLRDTAPYPEKTDVIVVGAGAVGIPLAVQLARGGKRVLLLEAGGRAKTGTLQGFEGTTSVGRHLRGLQEARLRSLGG
TTNAWGGQLLEFDPIVFEQRDWVDGSRWPITRRDLDPFYELTFEMLGMRDRIKNTETLWQKLNVAPPDTGRDLDLFFTRW
TPEPNFSRVFRSDLATNPNLHVMTNAPVVGLSRLESGRRFGVTVAPRHGDTLSLSARHVVLAQGTIEIARLLSMPLTSGE
IAPWTGNPWLGKGFCDHVDADVGTVRLTDPERFHQIFDGALLHGHKYLPKLKLSSEAQRRRRLLGIAGHFVFQSGHENGL
KAIKGIVRSLMQGHLNMSELQDWRALAAIPKVAIPAAMHLLRNHRIYNPGDGGITLRVTGEQMPLRESGLRLTGKNDPQG
MPIAEIDWRIDGQPELETIATFSSLVADFLKREGLAQVSLDPRLTARDPGFLSKIEDGFHQMGMARMGASPSDGVVDKDL
RVFGTDNLFVAGAAAFRPAGFPNPTLTAIALALRLGDFLLRQPAGRDAFAAQAG

Sequences:

>Translated_534_residues
MIEDLRDTAPYPEKTDVIVVGAGAVGIPLAVQLARGGKRVLLLEAGGRAKTGTLQGFEGTTSVGRHLRGLQEARLRSLGG
TTNAWGGQLLEFDPIVFEQRDWVDGSRWPITRRDLDPFYELTFEMLGMRDRIKNTETLWQKLNVAPPDTGRDLDLFFTRW
TPEPNFSRVFRSDLATNPNLHVMTNAPVVGLSRLESGRRFGVTVAPRHGDTLSLSARHVVLAQGTIEIARLLSMPLTSGE
IAPWTGNPWLGKGFCDHVDADVGTVRLTDPERFHQIFDGALLHGHKYLPKLKLSSEAQRRRRLLGIAGHFVFQSGHENGL
KAIKGIVRSLMQGHLNMSELQDWRALAAIPKVAIPAAMHLLRNHRIYNPGDGGITLRVTGEQMPLRESGLRLTGKNDPQG
MPIAEIDWRIDGQPELETIATFSSLVADFLKREGLAQVSLDPRLTARDPGFLSKIEDGFHQMGMARMGASPSDGVVDKDL
RVFGTDNLFVAGAAAFRPAGFPNPTLTAIALALRLGDFLLRQPAGRDAFAAQAG
>Mature_534_residues
MIEDLRDTAPYPEKTDVIVVGAGAVGIPLAVQLARGGKRVLLLEAGGRAKTGTLQGFEGTTSVGRHLRGLQEARLRSLGG
TTNAWGGQLLEFDPIVFEQRDWVDGSRWPITRRDLDPFYELTFEMLGMRDRIKNTETLWQKLNVAPPDTGRDLDLFFTRW
TPEPNFSRVFRSDLATNPNLHVMTNAPVVGLSRLESGRRFGVTVAPRHGDTLSLSARHVVLAQGTIEIARLLSMPLTSGE
IAPWTGNPWLGKGFCDHVDADVGTVRLTDPERFHQIFDGALLHGHKYLPKLKLSSEAQRRRRLLGIAGHFVFQSGHENGL
KAIKGIVRSLMQGHLNMSELQDWRALAAIPKVAIPAAMHLLRNHRIYNPGDGGITLRVTGEQMPLRESGLRLTGKNDPQG
MPIAEIDWRIDGQPELETIATFSSLVADFLKREGLAQVSLDPRLTARDPGFLSKIEDGFHQMGMARMGASPSDGVVDKDL
RVFGTDNLFVAGAAAFRPAGFPNPTLTAIALALRLGDFLLRQPAGRDAFAAQAG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58576; Mature: 58576

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEDLRDTAPYPEKTDVIVVGAGAVGIPLAVQLARGGKRVLLLEAGGRAKTGTLQGFEGT
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCH
TSVGRHLRGLQEARLRSLGGTTNAWGGQLLEFDPIVFEQRDWVDGSRWPITRRDLDPFYE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCHHHH
LTFEMLGMRDRIKNTETLWQKLNVAPPDTGRDLDLFFTRWTPEPNFSRVFRSDLATNPNL
HHHHHHCHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCE
HVMTNAPVVGLSRLESGRRFGVTVAPRHGDTLSLSARHVVLAQGTIEIARLLSMPLTSGE
EEEECCCCHHHHHHCCCCEECEEECCCCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCC
IAPWTGNPWLGKGFCDHVDADVGTVRLTDPERFHQIFDGALLHGHKYLPKLKLSSEAQRR
CCCCCCCCCCCCCCHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RRLLGIAGHFVFQSGHENGLKAIKGIVRSLMQGHLNMSELQDWRALAAIPKVAIPAAMHL
HHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LRNHRIYNPGDGGITLRVTGEQMPLRESGLRLTGKNDPQGMPIAEIDWRIDGQPELETIA
HHCCCCCCCCCCCEEEEECCCCCCHHHCCCEEECCCCCCCCCEEEEEEEECCCCCHHHHH
TFSSLVADFLKREGLAQVSLDPRLTARDPGFLSKIEDGFHQMGMARMGASPSDGVVDKDL
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
RVFGTDNLFVAGAAAFRPAGFPNPTLTAIALALRLGDFLLRQPAGRDAFAAQAG
EEEECCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIEDLRDTAPYPEKTDVIVVGAGAVGIPLAVQLARGGKRVLLLEAGGRAKTGTLQGFEGT
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCH
TSVGRHLRGLQEARLRSLGGTTNAWGGQLLEFDPIVFEQRDWVDGSRWPITRRDLDPFYE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCHHHH
LTFEMLGMRDRIKNTETLWQKLNVAPPDTGRDLDLFFTRWTPEPNFSRVFRSDLATNPNL
HHHHHHCHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCE
HVMTNAPVVGLSRLESGRRFGVTVAPRHGDTLSLSARHVVLAQGTIEIARLLSMPLTSGE
EEEECCCCHHHHHHCCCCEECEEECCCCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCC
IAPWTGNPWLGKGFCDHVDADVGTVRLTDPERFHQIFDGALLHGHKYLPKLKLSSEAQRR
CCCCCCCCCCCCCCHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RRLLGIAGHFVFQSGHENGLKAIKGIVRSLMQGHLNMSELQDWRALAAIPKVAIPAAMHL
HHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LRNHRIYNPGDGGITLRVTGEQMPLRESGLRLTGKNDPQGMPIAEIDWRIDGQPELETIA
HHCCCCCCCCCCCEEEEECCCCCCHHHCCCEEECCCCCCCCCEEEEEEEECCCCCHHHHH
TFSSLVADFLKREGLAQVSLDPRLTARDPGFLSKIEDGFHQMGMARMGASPSDGVVDKDL
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
RVFGTDNLFVAGAAAFRPAGFPNPTLTAIALALRLGDFLLRQPAGRDAFAAQAG
EEEECCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA