| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632985
Identifier: 110632985
GI number: 110632985
Start: 706265
End: 706723
Strand: Reverse
Name: 110632985
Synonym: Meso_0628
Alternate gene names: NA
Gene position: 706723-706265 (Counterclockwise)
Preceding gene: 110632986
Following gene: 110632984
Centisome position: 16.02
GC content: 58.39
Gene sequence:
>459_bases ATGATGGCCAAGCCCTCCCAGAGATCGGCGGAGGCTACAAGGAAGACCGCGTCGGGACCGGTCCTCCTCTCCGGCGGCAA TCCTCAAATAGCCAAAGGCTATGGCGATGCCCCGGTGAAGGCCTATATCGCGGCGATGCCGGGCTGGAAATCCGGCATCG GGCGCCGCATGGACGATATCATCGTGCAAACCGTCCCCGGCGTGCGCAAGGCCGTCAAATGGAACTCGCCTTTCTATGGC GCAGGGGATGAGGACCAGGGCTGGTTCCTCAGCTTTCATTGCTTTGCAAAATACGTGAAAGTGACTTTCTTCCGCGGCGC ATCGCTGCATCCCATCCCCTCCGGCAAGTCCAAGCATCCGGAAGTGCGCTACCTCGATATCTATGAAAATCAATTCGACG AAGCCCAGTTTACCGATTGGGTGAAGCAAGCCAGCCAATTGCCCGGCGAGCGAATGTGA
Upstream 100 bases:
>100_bases TCCCGCTCTTCTTGCTGATGTTCACCGGCCTCTATATGTTCGCGCTGCCATATGCCAGGAGGTGGCGCGGCGGCCGACGC ACCGCCGGATAGGAGCGGAC
Downstream 100 bases:
>100_bases GCGGACCAACCATGAAGAAAATGGCGACCACCAAGCGGAAAAGCGGCCCCAGTGATGCCGGAGAAGAAATCTCCCCCTCG GAACTGATCGATGCAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MMAKPSQRSAEATRKTASGPVLLSGGNPQIAKGYGDAPVKAYIAAMPGWKSGIGRRMDDIIVQTVPGVRKAVKWNSPFYG AGDEDQGWFLSFHCFAKYVKVTFFRGASLHPIPSGKSKHPEVRYLDIYENQFDEAQFTDWVKQASQLPGERM
Sequences:
>Translated_152_residues MMAKPSQRSAEATRKTASGPVLLSGGNPQIAKGYGDAPVKAYIAAMPGWKSGIGRRMDDIIVQTVPGVRKAVKWNSPFYG AGDEDQGWFLSFHCFAKYVKVTFFRGASLHPIPSGKSKHPEVRYLDIYENQFDEAQFTDWVKQASQLPGERM >Mature_152_residues MMAKPSQRSAEATRKTASGPVLLSGGNPQIAKGYGDAPVKAYIAAMPGWKSGIGRRMDDIIVQTVPGVRKAVKWNSPFYG AGDEDQGWFLSFHCFAKYVKVTFFRGASLHPIPSGKSKHPEVRYLDIYENQFDEAQFTDWVKQASQLPGERM
Specific function: Unknown
COG id: COG5649
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16856; Mature: 16856
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKPSQRSAEATRKTASGPVLLSGGNPQIAKGYGDAPVKAYIAAMPGWKSGIGRRMDDI CCCCCCCCHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHEEECCCCHHHHHHHHHHH IVQTVPGVRKAVKWNSPFYGAGDEDQGWFLSFHCFAKYVKVTFFRGASLHPIPSGKSKHP HHHCCCHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHEECCCCCCCCCCCCCCCC EVRYLDIYENQFDEAQFTDWVKQASQLPGERM CEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMAKPSQRSAEATRKTASGPVLLSGGNPQIAKGYGDAPVKAYIAAMPGWKSGIGRRMDDI CCCCCCCCHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHEEECCCCHHHHHHHHHHH IVQTVPGVRKAVKWNSPFYGAGDEDQGWFLSFHCFAKYVKVTFFRGASLHPIPSGKSKHP HHHCCCHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHEECCCCCCCCCCCCCCCC EVRYLDIYENQFDEAQFTDWVKQASQLPGERM CEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA