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The map label for this gene is glxA [H]

Identifier: 110632979

GI number: 110632979

Start: 699504

End: 700526

Strand: Reverse

Name: glxA [H]

Synonym: Meso_0622

Alternate gene names: 110632979

Gene position: 700526-699504 (Counterclockwise)

Preceding gene: 110632984

Following gene: 110632976

Centisome position: 15.88

GC content: 63.44

Gene sequence:

>1023_bases
ATGCTCAAGCGCGTCAGCATCGTGGTCTTTCGCGAATGCGACCCGTCGATCATCTACGGCATCTTTGACACATTGTGGGC
GGTGGGGAGGCTCAAAGGGCTGCCCGGCGGGCCGCTTTTCGAGCCACGCATCGTCGCGGCCGAGCACGGGCCGCTTGAGC
TCATCACCGGCGTCAGCATCGTTCCGCAAGACCAGATCGACGATGTCGAGCAGACGGAGATCGTGTTCGTGCCGAACCCG
ATCGTGTGGACGCCCGAGGAACTTAGCGCCCTTGACCGCCGGATCATCGATTGGGTCAAGAAGATGCACGATCGAGGCGC
GATGATCTGCTCCGCCTGCGGCGGCTCGCTCGTGCTCGCCGCGGCCGGGCTCCTCTCCGGCCGTGAAGCGACGACGCACT
GGACCCATGTCCCCGTGTTCCGCCACGCGTTTCCCGATGTTCGGCTGCATGAAGACCGCATCCTGGTCCAGACCGGCGAC
GGCCATAGGATCATCTGCTGCGGCGGCGCCTCGTCATGGCAGGATCTTGCTCTCTTCCTCATTGCCCGCTACGGCGGCGG
CGAGGAAGCGATCCGCATTTCCAGGTTCTTCCTCTATCAGTGGCACCGCGACGGCCAGCTTCCCTACGCCTCCATGGCCG
TCAATGTCATCCATGGCGATGCCGTCGTTCTCAAATGCCAGACCTGGCTTGCGGAGAACTACGACCGTCCGGACGTCATT
TCAGAGGTCACTCGGATTTCCGGCCTGCCCAAACGCACATTTGACCGACGCTTCAAGACGGCCACCGGCTACTCGCCGCT
TGCCTATGTCCAGGCGCTGCGCATAGAGGAGGCGAAACAGATGCTGGAGACCGGCTCATCGCTGGTAGACGCTGTCGGCC
GCGAGGTCGGCTACGAAGATGCCGCATCCTTCCGCCGTCTTTTCCGGCGCCTGACGGGCATTTCGCCGGGCGACTACCGC
CGCCGTTTCAGGCTGCCCGACTATGTTCGATCCAGTTCCCGGGTGGGGGAACCCGGAAGGTAG

Upstream 100 bases:

>100_bases
ATCGACTGCAGGGCCGCGTAAATAGATGTGGCGCCGCTCATAGAAGAGAGGCAAAATAGCCGGAACAGTGCGAGATGAGC
CAAGCTGAGAAGGCGAAGCA

Downstream 100 bases:

>100_bases
GCGGACCGAACGCACTTCAGCGCCGGAGTATCGAGGCGATCGCCTTTTGCAGCTCTGCCATGGAGAAGGGCTTGCCTATT
ACAGGCTGGCCGGTGAACTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLKRVSIVVFRECDPSIIYGIFDTLWAVGRLKGLPGGPLFEPRIVAAEHGPLELITGVSIVPQDQIDDVEQTEIVFVPNP
IVWTPEELSALDRRIIDWVKKMHDRGAMICSACGGSLVLAAAGLLSGREATTHWTHVPVFRHAFPDVRLHEDRILVQTGD
GHRIICCGGASSWQDLALFLIARYGGGEEAIRISRFFLYQWHRDGQLPYASMAVNVIHGDAVVLKCQTWLAENYDRPDVI
SEVTRISGLPKRTFDRRFKTATGYSPLAYVQALRIEEAKQMLETGSSLVDAVGREVGYEDAASFRRLFRRLTGISPGDYR
RRFRLPDYVRSSSRVGEPGR

Sequences:

>Translated_340_residues
MLKRVSIVVFRECDPSIIYGIFDTLWAVGRLKGLPGGPLFEPRIVAAEHGPLELITGVSIVPQDQIDDVEQTEIVFVPNP
IVWTPEELSALDRRIIDWVKKMHDRGAMICSACGGSLVLAAAGLLSGREATTHWTHVPVFRHAFPDVRLHEDRILVQTGD
GHRIICCGGASSWQDLALFLIARYGGGEEAIRISRFFLYQWHRDGQLPYASMAVNVIHGDAVVLKCQTWLAENYDRPDVI
SEVTRISGLPKRTFDRRFKTATGYSPLAYVQALRIEEAKQMLETGSSLVDAVGREVGYEDAASFRRLFRRLTGISPGDYR
RRFRLPDYVRSSSRVGEPGR
>Mature_340_residues
MLKRVSIVVFRECDPSIIYGIFDTLWAVGRLKGLPGGPLFEPRIVAAEHGPLELITGVSIVPQDQIDDVEQTEIVFVPNP
IVWTPEELSALDRRIIDWVKKMHDRGAMICSACGGSLVLAAAGLLSGREATTHWTHVPVFRHAFPDVRLHEDRILVQTGD
GHRIICCGGASSWQDLALFLIARYGGGEEAIRISRFFLYQWHRDGQLPYASMAVNVIHGDAVVLKCQTWLAENYDRPDVI
SEVTRISGLPKRTFDRRFKTATGYSPLAYVQALRIEEAKQMLETGSSLVDAVGREVGYEDAASFRRLFRRLTGISPGDYR
RRFRLPDYVRSSSRVGEPGR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38120; Mature: 38120

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRVSIVVFRECDPSIIYGIFDTLWAVGRLKGLPGGPLFEPRIVAAEHGPLELITGVSI
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCEE
VPQDQIDDVEQTEIVFVPNPIVWTPEELSALDRRIIDWVKKMHDRGAMICSACGGSLVLA
CCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHH
AAGLLSGREATTHWTHVPVFRHAFPDVRLHEDRILVQTGDGHRIICCGGASSWQDLALFL
HHHHHCCCCCCCCEEECCHHHHCCCCCEEECCEEEEEECCCCEEEEECCCCCHHHHHHHH
IARYGGGEEAIRISRFFLYQWHRDGQLPYASMAVNVIHGDAVVLKCQTWLAENYDRPDVI
HHHCCCCHHHHHHHEEEEEEECCCCCCCHHHHEEEEEECCEEEEEEEHHHHCCCCCCHHH
SEVTRISGLPKRTFDRRFKTATGYSPLAYVQALRIEEAKQMLETGSSLVDAVGREVGYED
HHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
AASFRRLFRRLTGISPGDYRRRFRLPDYVRSSSRVGEPGR
HHHHHHHHHHHHCCCCCHHHHHCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLKRVSIVVFRECDPSIIYGIFDTLWAVGRLKGLPGGPLFEPRIVAAEHGPLELITGVSI
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCEE
VPQDQIDDVEQTEIVFVPNPIVWTPEELSALDRRIIDWVKKMHDRGAMICSACGGSLVLA
CCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHH
AAGLLSGREATTHWTHVPVFRHAFPDVRLHEDRILVQTGDGHRIICCGGASSWQDLALFL
HHHHHCCCCCCCCEEECCHHHHCCCCCEEECCEEEEEECCCCEEEEECCCCCHHHHHHHH
IARYGGGEEAIRISRFFLYQWHRDGQLPYASMAVNVIHGDAVVLKCQTWLAENYDRPDVI
HHHCCCCHHHHHHHEEEEEEECCCCCCCHHHHEEEEEECCEEEEEEEHHHHCCCCCCHHH
SEVTRISGLPKRTFDRRFKTATGYSPLAYVQALRIEEAKQMLETGSSLVDAVGREVGYED
HHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
AASFRRLFRRLTGISPGDYRRRFRLPDYVRSSSRVGEPGR
HHHHHHHHHHHHCCCCCHHHHHCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]