| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632964
Identifier: 110632964
GI number: 110632964
Start: 681527
End: 681949
Strand: Reverse
Name: 110632964
Synonym: Meso_0607
Alternate gene names: NA
Gene position: 681949-681527 (Counterclockwise)
Preceding gene: 110632965
Following gene: 110632962
Centisome position: 15.46
GC content: 61.47
Gene sequence:
>423_bases ATGAGCGGAAAACAGCGCCTGTTCCGCCGCTTCCTGGAGTCCGGCTCAGGCGCGGCGGCTGTCGAGTTTGCCATCGTTTG CATGCCGCTGCTCCTGATCTGTCTCGGGATCGTGGAATTCGGCCGCGCCTTCTTTGTCCGTAATGACCTTTCCTATGCCG CCGATGTGGCCGCACGCAAGGTTCTGATCGGCCAGATACCAGCGGGCGCGCCGTCGTCCGATGCCGCCAGCGGCCTTGAA ACCGCGGTTCGTGAAGCCTTCGTCGGGGACGCTTCCCTGCTGCAAATTGCGGTTGGGGAAGAAACCGTCGACGGCGCACG ATATCGCACATTATCAATTCGCTACCCGTTCACCTTCCTTGTTCCGGGATTGGATGACAGTCCATTTGCGCTCGGCGTAT CCCGGCGCATCCCCGCCGGATGA
Upstream 100 bases:
>100_bases TCTTTTACCGCCTTCAGGCCTCGAAGCTTTACGACGCGATGTCATTGCCGGAGATCCTTGCGGATTTCAGGCTGAGCTCG TCCGTTCAGGTGCAGGTGCG
Downstream 100 bases:
>100_bases TTTTCCTTACTGGCCGGCTTGCCCGGTATCGGTGAAGCCGCTGCGCGTGTTGATCTGGGATGCCGTCGCGCTGAATAGTT CCGCATCGTCCCCGACGGAC
Product: TadE-like
Products: NA
Alternate protein names: Type IV Pilus Associated TadE Family Protein; TadE-Like
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSGKQRLFRRFLESGSGAAAVEFAIVCMPLLLICLGIVEFGRAFFVRNDLSYAADVAARKVLIGQIPAGAPSSDAASGLE TAVREAFVGDASLLQIAVGEETVDGARYRTLSIRYPFTFLVPGLDDSPFALGVSRRIPAG
Sequences:
>Translated_140_residues MSGKQRLFRRFLESGSGAAAVEFAIVCMPLLLICLGIVEFGRAFFVRNDLSYAADVAARKVLIGQIPAGAPSSDAASGLE TAVREAFVGDASLLQIAVGEETVDGARYRTLSIRYPFTFLVPGLDDSPFALGVSRRIPAG >Mature_139_residues SGKQRLFRRFLESGSGAAAVEFAIVCMPLLLICLGIVEFGRAFFVRNDLSYAADVAARKVLIGQIPAGAPSSDAASGLET AVREAFVGDASLLQIAVGEETVDGARYRTLSIRYPFTFLVPGLDDSPFALGVSRRIPAG
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14841; Mature: 14710
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKQRLFRRFLESGSGAAAVEFAIVCMPLLLICLGIVEFGRAFFVRNDLSYAADVAARK CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VLIGQIPAGAPSSDAASGLETAVREAFVGDASLLQIAVGEETVDGARYRTLSIRYPFTFL HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCEEEEEEEECCEEEE VPGLDDSPFALGVSRRIPAG ECCCCCCCCEECCCCCCCCC >Mature Secondary Structure SGKQRLFRRFLESGSGAAAVEFAIVCMPLLLICLGIVEFGRAFFVRNDLSYAADVAARK CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VLIGQIPAGAPSSDAASGLETAVREAFVGDASLLQIAVGEETVDGARYRTLSIRYPFTFL HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCEEEEEEEECCEEEE VPGLDDSPFALGVSRRIPAG ECCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA