| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is ordL [H]
Identifier: 110632926
GI number: 110632926
Start: 626874
End: 628181
Strand: Reverse
Name: ordL [H]
Synonym: Meso_0567
Alternate gene names: 110632926
Gene position: 628181-626874 (Counterclockwise)
Preceding gene: 110632928
Following gene: 110632925
Centisome position: 14.24
GC content: 58.87
Gene sequence:
>1308_bases ATGCAGCGCGACATATTCAAGAGCGAGTTCAAGGAGGAGCCTTACTGGTGGGATTTGGCACGGCCATTCTCATCGGTCGC GAGCCTCCCGGCGCGCAGCGACCTCGTTATAGTCGGAGCCGGGCTTTGTGGGCTCAGCGCCGCTTTGCGCGCCTTGGAGC TGGGCGTCCGTCCGCTCGTGCTTGATGTCGGCTTCATAGGCGGCGAGGCCAGCTCGCGCAGCGGCGCTATGGTTTCAAGT GGACAGAAATTTCTGATCAGCGGCGCGGCTCAGTCACTAGGAAGCGAAATTGTCAACGAACTAATAAACGTGCATGCCGA TGCGTTTCGCTATGTGCGAACCTTGGCGACGAAGGGTGGAGTGGAAGGGCAGTTTCGAACTTCCGGAAGGCTCTTTCTTG CTGCTGTACCAGAGCACTTCCAACGCTTCGCGCAGTACGCAGAGATACTGAATGAAATTGCGCAAGTCACCGCGCGGACG GTTTGCAAACAGGATCTCCGTTCTGAACTGGCAAGCCAGCGGTATTACGGCGGCCTGTTGGTAGAGGAATTCGGCGGTCT GCATCCCTCGCTCTTCGCCTGCAACCTCGCGCGGGAAGTTCAGCGGAAAGGTGCAGAACTTCGTTCGCATACTCGGGTGC TGGCCGTGAAAGCCCGCGGGTCGGAATTTATCGTCGAGACCGACGCGGGGTCGGTGCGGGCTGGGCAGGTACTGTTCGCC ACTAACGGCTACACCGACAATGCAATGCGCCTTGTCCGGCGTCGCATCGCGCCTGTCGGCTCATTCATGATCGCGACCGA AGAATTGGGTACCGACCAGGTTGCCGCGGCGATGCCCGGGCTTCGCATGTATTCAGACACGAAGCGTAATCTTTGGTTCT TCCGGCCGTCGCCCGATGGGAAGCGAATACTATTCGGCGGACGGCCTGGAATTCTGCCTCGCGCTCCTCGCCAGGCGGCA ATTAAACTACACCAATACATGTCCTTGGTTTTTCCGTCATTGCATGATGTGAAGATCACCCACGCCTGGACGGGGACCAT CGCGATGACACGGCGGCAGGTCCAGCACATCGGTCAAAGAAAGGGAATCTGGTTCGCCGTCGGCTGCAACGGCAGCGGCG TCGCCATCATGCCATGGGTTGGCCGGCTGGCGGTCGAGCGAATGCTTGGCACGCGGACGGAGTCGACGGTTTTCGAACGA ATCGCCTTCGATGTAATGCCGACCATTGAAGGCAAACCATGGTTTGTTCCGTTCGCGGCTGGATGGTTCGGCTTAAACGA TTGGATCGATCGCATGCGGCATGCGTGA
Upstream 100 bases:
>100_bases GCTACGCCGTAATTTTGCAAAGTTTTTATTGTTGACAATTTAACGACTTCGAACCAAGCTCTCTCCATCGGCACCAAGAC CGACGAAGTGCAGGGGACAA
Downstream 100 bases:
>100_bases AAGCAGAAACATCGGAGGCAAAGCAATGGCTGACATAACAGATACGAACAGAGACGAATGGAAGGCAGCCGCCCAGAAAG CCTCCATCGAAGGCCGAGCC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MQRDIFKSEFKEEPYWWDLARPFSSVASLPARSDLVIVGAGLCGLSAALRALELGVRPLVLDVGFIGGEASSRSGAMVSS GQKFLISGAAQSLGSEIVNELINVHADAFRYVRTLATKGGVEGQFRTSGRLFLAAVPEHFQRFAQYAEILNEIAQVTART VCKQDLRSELASQRYYGGLLVEEFGGLHPSLFACNLAREVQRKGAELRSHTRVLAVKARGSEFIVETDAGSVRAGQVLFA TNGYTDNAMRLVRRRIAPVGSFMIATEELGTDQVAAAMPGLRMYSDTKRNLWFFRPSPDGKRILFGGRPGILPRAPRQAA IKLHQYMSLVFPSLHDVKITHAWTGTIAMTRRQVQHIGQRKGIWFAVGCNGSGVAIMPWVGRLAVERMLGTRTESTVFER IAFDVMPTIEGKPWFVPFAAGWFGLNDWIDRMRHA
Sequences:
>Translated_435_residues MQRDIFKSEFKEEPYWWDLARPFSSVASLPARSDLVIVGAGLCGLSAALRALELGVRPLVLDVGFIGGEASSRSGAMVSS GQKFLISGAAQSLGSEIVNELINVHADAFRYVRTLATKGGVEGQFRTSGRLFLAAVPEHFQRFAQYAEILNEIAQVTART VCKQDLRSELASQRYYGGLLVEEFGGLHPSLFACNLAREVQRKGAELRSHTRVLAVKARGSEFIVETDAGSVRAGQVLFA TNGYTDNAMRLVRRRIAPVGSFMIATEELGTDQVAAAMPGLRMYSDTKRNLWFFRPSPDGKRILFGGRPGILPRAPRQAA IKLHQYMSLVFPSLHDVKITHAWTGTIAMTRRQVQHIGQRKGIWFAVGCNGSGVAIMPWVGRLAVERMLGTRTESTVFER IAFDVMPTIEGKPWFVPFAAGWFGLNDWIDRMRHA >Mature_435_residues MQRDIFKSEFKEEPYWWDLARPFSSVASLPARSDLVIVGAGLCGLSAALRALELGVRPLVLDVGFIGGEASSRSGAMVSS GQKFLISGAAQSLGSEIVNELINVHADAFRYVRTLATKGGVEGQFRTSGRLFLAAVPEHFQRFAQYAEILNEIAQVTART VCKQDLRSELASQRYYGGLLVEEFGGLHPSLFACNLAREVQRKGAELRSHTRVLAVKARGSEFIVETDAGSVRAGQVLFA TNGYTDNAMRLVRRRIAPVGSFMIATEELGTDQVAAAMPGLRMYSDTKRNLWFFRPSPDGKRILFGGRPGILPRAPRQAA IKLHQYMSLVFPSLHDVKITHAWTGTIAMTRRQVQHIGQRKGIWFAVGCNGSGVAIMPWVGRLAVERMLGTRTESTVFER IAFDVMPTIEGKPWFVPFAAGWFGLNDWIDRMRHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=411, Percent_Identity=26.0340632603406, Blast_Score=116, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 48063; Mature: 48063
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRDIFKSEFKEEPYWWDLARPFSSVASLPARSDLVIVGAGLCGLSAALRALELGVRPLV CCCCHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEE LDVGFIGGEASSRSGAMVSSGQKFLISGAAQSLGSEIVNELINVHADAFRYVRTLATKGG EEEEEECCCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VEGQFRTSGRLFLAAVPEHFQRFAQYAEILNEIAQVTARTVCKQDLRSELASQRYYGGLL CCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VEEFGGLHPSLFACNLAREVQRKGAELRSHTRVLAVKARGSEFIVETDAGSVRAGQVLFA HHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCEEEEECCCCCCCCCEEEEE TNGYTDNAMRLVRRRIAPVGSFMIATEELGTDQVAAAMPGLRMYSDTKRNLWFFRPSPDG ECCCCHHHHHHHHHHHCCCCHHEEEHHHCCCHHHHHHCCCCHHHCCCCCCEEEECCCCCC KRILFGGRPGILPRAPRQAAIKLHQYMSLVFPSLHDVKITHAWTGTIAMTRRQVQHIGQR CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCC KGIWFAVGCNGSGVAIMPWVGRLAVERMLGTRTESTVFERIAFDVMPTIEGKPWFVPFAA CCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC GWFGLNDWIDRMRHA CCCCHHHHHHHHHCC >Mature Secondary Structure MQRDIFKSEFKEEPYWWDLARPFSSVASLPARSDLVIVGAGLCGLSAALRALELGVRPLV CCCCHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEE LDVGFIGGEASSRSGAMVSSGQKFLISGAAQSLGSEIVNELINVHADAFRYVRTLATKGG EEEEEECCCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VEGQFRTSGRLFLAAVPEHFQRFAQYAEILNEIAQVTARTVCKQDLRSELASQRYYGGLL CCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VEEFGGLHPSLFACNLAREVQRKGAELRSHTRVLAVKARGSEFIVETDAGSVRAGQVLFA HHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCEEEEECCCCCCCCCEEEEE TNGYTDNAMRLVRRRIAPVGSFMIATEELGTDQVAAAMPGLRMYSDTKRNLWFFRPSPDG ECCCCHHHHHHHHHHHCCCCHHEEEHHHCCCHHHHHHCCCCHHHCCCCCCEEEECCCCCC KRILFGGRPGILPRAPRQAAIKLHQYMSLVFPSLHDVKITHAWTGTIAMTRRQVQHIGQR CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCC KGIWFAVGCNGSGVAIMPWVGRLAVERMLGTRTESTVFERIAFDVMPTIEGKPWFVPFAA CCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC GWFGLNDWIDRMRHA CCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430; 10400573 [H]