| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632896
Identifier: 110632896
GI number: 110632896
Start: 589507
End: 590151
Strand: Reverse
Name: 110632896
Synonym: Meso_0536
Alternate gene names: NA
Gene position: 590151-589507 (Counterclockwise)
Preceding gene: 110632897
Following gene: 110632895
Centisome position: 13.37
GC content: 63.57
Gene sequence:
>645_bases ATGCCTGAGATCATCGAAACCACCGTCTATCGCCTCGACGAACTCTCCGCTGCTGCGAAGGACGCCGCGCGCGGATGGTA CCGCGACGGCAGCTTCGATTATGACTGGTTCGAGTTCGCCTATGACGACTTCGAACGCATTTGCATGATCCTCGGCATCA GCCTCAGGAGGCGCCCTGTCCGACTGTTCGGCGGTAGCACCCGCTCGAAACCCTGCATCTGGTTTTCGGGCTTCTGGAGC CAGGGCGACGGAGCCTGCTTCGAGGGCGACTACCGACACGCGAGATCCGCCGCCGGCCGCATCCGGGCCTATGCACCGAC GGATACCGCGCTTCACCGGATCGCCGATACCCTCCAGGCCGTTCAGAGGCGCAACTTCTACCAGCTCCGAGCCACGATGA CCCACCGGGGGCGCTACTATCACGAGCATTGCATGGCCATCATGGTCGATCGCGACAGTCCCGTAGGTCAGGACATGACC GCCGATGCAGAAGATGCCGTGTCGGAAGCGCTCCGCGATCTGGCCCGCTGGCTCTACCGCCAGCTCGAACGGGAATACGA GCATCTGACCTCGGACGAGGTGGTCGACGAGGCGATTGCGGCGAACGGCTACACCTTCACCGAAGCGGGCCGGCGCTTCG GCTGA
Upstream 100 bases:
>100_bases GGTGGCGGTGCGCACGTCCTCGACCTCGGTACGGGTGAGACCCTCGGATGGATCGACACCGATGGCTGGCTCGCCGCCGC GGTGGATGGAGGTAATCCCG
Downstream 100 bases:
>100_bases TTCAGCCTGCCGCTCGCACGTCGAGAGGCAGAGGGGGCCGGGACGGGTTTGAGCCCGGACGGTCGAGAGAGAGCGGCCGA GGGCTTGCCCTGTTCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPEIIETTVYRLDELSAAAKDAARGWYRDGSFDYDWFEFAYDDFERICMILGISLRRRPVRLFGGSTRSKPCIWFSGFWS QGDGACFEGDYRHARSAAGRIRAYAPTDTALHRIADTLQAVQRRNFYQLRATMTHRGRYYHEHCMAIMVDRDSPVGQDMT ADAEDAVSEALRDLARWLYRQLEREYEHLTSDEVVDEAIAANGYTFTEAGRRFG
Sequences:
>Translated_214_residues MPEIIETTVYRLDELSAAAKDAARGWYRDGSFDYDWFEFAYDDFERICMILGISLRRRPVRLFGGSTRSKPCIWFSGFWS QGDGACFEGDYRHARSAAGRIRAYAPTDTALHRIADTLQAVQRRNFYQLRATMTHRGRYYHEHCMAIMVDRDSPVGQDMT ADAEDAVSEALRDLARWLYRQLEREYEHLTSDEVVDEAIAANGYTFTEAGRRFG >Mature_213_residues PEIIETTVYRLDELSAAAKDAARGWYRDGSFDYDWFEFAYDDFERICMILGISLRRRPVRLFGGSTRSKPCIWFSGFWSQ GDGACFEGDYRHARSAAGRIRAYAPTDTALHRIADTLQAVQRRNFYQLRATMTHRGRYYHEHCMAIMVDRDSPVGQDMTA DAEDAVSEALRDLARWLYRQLEREYEHLTSDEVVDEAIAANGYTFTEAGRRFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24743; Mature: 24612
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIIETTVYRLDELSAAAKDAARGWYRDGSFDYDWFEFAYDDFERICMILGISLRRRPV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH RLFGGSTRSKPCIWFSGFWSQGDGACFEGDYRHARSAAGRIRAYAPTDTALHRIADTLQA HEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH VQRRNFYQLRATMTHRGRYYHEHCMAIMVDRDSPVGQDMTADAEDAVSEALRDLARWLYR HHHCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QLEREYEHLTSDEVVDEAIAANGYTFTEAGRRFG HHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCC >Mature Secondary Structure PEIIETTVYRLDELSAAAKDAARGWYRDGSFDYDWFEFAYDDFERICMILGISLRRRPV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH RLFGGSTRSKPCIWFSGFWSQGDGACFEGDYRHARSAAGRIRAYAPTDTALHRIADTLQA HEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH VQRRNFYQLRATMTHRGRYYHEHCMAIMVDRDSPVGQDMTADAEDAVSEALRDLARWLYR HHHCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QLEREYEHLTSDEVVDEAIAANGYTFTEAGRRFG HHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA