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The map label for this gene is 110632883

Identifier: 110632883

GI number: 110632883

Start: 576768

End: 577829

Strand: Reverse

Name: 110632883

Synonym: Meso_0523

Alternate gene names: NA

Gene position: 577829-576768 (Counterclockwise)

Preceding gene: 110632884

Following gene: 110632882

Centisome position: 13.1

GC content: 64.6

Gene sequence:

>1062_bases
ATGTCCCCACGGCAGCGCCCCCTCTCCTTGAGCGAACGATCGCGGCTCGACCCGTTCGTCGTCGCCACCGGCGACGCCAG
TCCGCGCGACCAGCGCGATCTGATGGAGCGGCCCTTCTTCTCGCTCGCCAAGGCCAAGCGTACTTCACCGATCCACTACG
AAGCCGGCGACATCCGCGTCGAAGTCTTCGCGGTCCCCGAGCATGGCATGGCGACCATCTGGGATGCCGATATCCTGATC
TGGGCCGCGAGCCAGATCGTCGAGGCCGCAAACCTCGGCTTCCAAACCTCACGCTTCCTGCGCTTCACGCCGTATCAACT
CCTGACCGCGATCGGGCGCCAGACGGGATCGCGCGACTATCGGCTCCTCAAGGGCGCTCTGGCGCGCCTTCAGTCGACGG
TCATCCGCACCACGATCCGCAACGGCGAGCATTGGCGGCGTCAGCAATTCTCCTGGATCAACGAGTGGGGGGAATGCACG
ACGCGCGACGGCCGCGTAGAGGGCATGGAGTTCGTCCTGCCCGACTGGCTCTATCGCGGTGTCATTGACCGCTCGCTCGT
CCTCGCCATCGATCCCGCCTATTTCCGACTGACCGGCGGCATCGAGCGCTGGCTCTACCGGGTCGCCCGGAAGCATGCCG
GCCGTCAGCCAGCGGGCTGGACCTTCGAAATCGCGCACCTGCACGCCAAATCGGGCAGCCAGGCGCGTGTTTCCGACTTC
GCCATCGACATCCGCCGCATCGTCGCCCGCCAGCCGCTGCCCGGCTATCGCTTGGCTCTGGAGCGCACCGGTCGTCAAGA
ACGCCTGCACATCCGCCCCATCAACTTGTCCACAGGCCCTGTGGATGGTGTTGTGGATGCGATCGGGACTTCGGGCGCAA
ATGGTATCGGGATTTCGGGCGTTGCCGGCTCGGGACTTCGGGCGCGGAAATCGCAACTAACCCTCTGGCCTGAAACGGCG
ATTCCGAGCCTTAACTTAGAATCTAACAACGAATCTAACTTCTTGTTGGAGCGGGGCGACGGTGGAAAACCACCCCGCTG
CCGACGGAGCGCGCGGTCATGA

Upstream 100 bases:

>100_bases
ACCTCGACGTCCGATCCGCGCGGGAGTGTCCTTCCCGCCAAGCGCCATGCCGCCGTCACGCCTGCCTTCGGCGGCGGCCA
AGCCCGCTGAGCCGTCCGAC

Downstream 100 bases:

>100_bases
TCGTCGCGTTGCTCAATCAGAAAGGCGGCGTCGGCAAAACGACGCTCGCTCTCCATCTCGCCGGCGAATGGGCCAGCCGC
GATCAACGCGTCATGCTCAT

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSPRQRPLSLSERSRLDPFVVATGDASPRDQRDLMERPFFSLAKAKRTSPIHYEAGDIRVEVFAVPEHGMATIWDADILI
WAASQIVEAANLGFQTSRFLRFTPYQLLTAIGRQTGSRDYRLLKGALARLQSTVIRTTIRNGEHWRRQQFSWINEWGECT
TRDGRVEGMEFVLPDWLYRGVIDRSLVLAIDPAYFRLTGGIERWLYRVARKHAGRQPAGWTFEIAHLHAKSGSQARVSDF
AIDIRRIVARQPLPGYRLALERTGRQERLHIRPINLSTGPVDGVVDAIGTSGANGIGISGVAGSGLRARKSQLTLWPETA
IPSLNLESNNESNFLLERGDGGKPPRCRRSARS

Sequences:

>Translated_353_residues
MSPRQRPLSLSERSRLDPFVVATGDASPRDQRDLMERPFFSLAKAKRTSPIHYEAGDIRVEVFAVPEHGMATIWDADILI
WAASQIVEAANLGFQTSRFLRFTPYQLLTAIGRQTGSRDYRLLKGALARLQSTVIRTTIRNGEHWRRQQFSWINEWGECT
TRDGRVEGMEFVLPDWLYRGVIDRSLVLAIDPAYFRLTGGIERWLYRVARKHAGRQPAGWTFEIAHLHAKSGSQARVSDF
AIDIRRIVARQPLPGYRLALERTGRQERLHIRPINLSTGPVDGVVDAIGTSGANGIGISGVAGSGLRARKSQLTLWPETA
IPSLNLESNNESNFLLERGDGGKPPRCRRSARS
>Mature_352_residues
SPRQRPLSLSERSRLDPFVVATGDASPRDQRDLMERPFFSLAKAKRTSPIHYEAGDIRVEVFAVPEHGMATIWDADILIW
AASQIVEAANLGFQTSRFLRFTPYQLLTAIGRQTGSRDYRLLKGALARLQSTVIRTTIRNGEHWRRQQFSWINEWGECTT
RDGRVEGMEFVLPDWLYRGVIDRSLVLAIDPAYFRLTGGIERWLYRVARKHAGRQPAGWTFEIAHLHAKSGSQARVSDFA
IDIRRIVARQPLPGYRLALERTGRQERLHIRPINLSTGPVDGVVDAIGTSGANGIGISGVAGSGLRARKSQLTLWPETAI
PSLNLESNNESNFLLERGDGGKPPRCRRSARS

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 39636; Mature: 39504

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRQRPLSLSERSRLDPFVVATGDASPRDQRDLMERPFFSLAKAKRTSPIHYEAGDIRV
CCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHCHHHHHHHHHCCCCCEEECCCEEE
EVFAVPEHGMATIWDADILIWAASQIVEAANLGFQTSRFLRFTPYQLLTAIGRQTGSRDY
EEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCHHEEECHHHHHHHHHHCCCCCHH
RLLKGALARLQSTVIRTTIRNGEHWRRQQFSWINEWGECTTRDGRVEGMEFVLPDWLYRG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
VIDRSLVLAIDPAYFRLTGGIERWLYRVARKHAGRQPAGWTFEIAHLHAKSGSQARVSDF
HHCCEEEEEECCHHEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHH
AIDIRRIVARQPLPGYRLALERTGRQERLHIRPINLSTGPVDGVVDAIGTSGANGIGISG
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCEECC
VAGSGLRARKSQLTLWPETAIPSLNLESNNESNFLLERGDGGKPPRCRRSARS
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCC
>Mature Secondary Structure 
SPRQRPLSLSERSRLDPFVVATGDASPRDQRDLMERPFFSLAKAKRTSPIHYEAGDIRV
CCCCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHCHHHHHHHHHCCCCCEEECCCEEE
EVFAVPEHGMATIWDADILIWAASQIVEAANLGFQTSRFLRFTPYQLLTAIGRQTGSRDY
EEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCHHEEECHHHHHHHHHHCCCCCHH
RLLKGALARLQSTVIRTTIRNGEHWRRQQFSWINEWGECTTRDGRVEGMEFVLPDWLYRG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
VIDRSLVLAIDPAYFRLTGGIERWLYRVARKHAGRQPAGWTFEIAHLHAKSGSQARVSDF
HHCCEEEEEECCHHEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHH
AIDIRRIVARQPLPGYRLALERTGRQERLHIRPINLSTGPVDGVVDAIGTSGANGIGISG
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCEECC
VAGSGLRARKSQLTLWPETAIPSLNLESNNESNFLLERGDGGKPPRCRRSARS
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]