| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is cutL [H]
Identifier: 110632835
GI number: 110632835
Start: 522722
End: 525103
Strand: Reverse
Name: cutL [H]
Synonym: Meso_0474
Alternate gene names: 110632835
Gene position: 525103-522722 (Counterclockwise)
Preceding gene: 110632836
Following gene: 110632834
Centisome position: 11.9
GC content: 58.61
Gene sequence:
>2382_bases ATGCCTACCTTAGCTGAGCAATCGGCCGTCTCCAGCTCCATTCCTCGCATCGACGCGCATCGTTATGTGAGTGGGAAGCC GGTTTATACCTCTGATCTACTCCCAGCTGGCTGCCTCCATATGGCTCTGTTGCGCAGTCCGCATCCGCGCGCGCGCATCG TTAGTCTTGATGTAATGAAGGCAAAGGCAGCGCCCGATATCGTTGAGGTTGTGACCGCAGTAGACCTCGACGATCTAAAG CCGATCCCTGCGGCACTTCCCTTCAGGAGCGACGTGGAGGGGCGAGGAACGATTGTCGGTCGATGTCTTGCGGATGGCGA GGTTTGTTACATCGGTCAACCAATCGCTGCTGTCGTCGCAACCAGTGTGCACAGCGCCCAGGCAGCTCTCGACCTGATCG AAGTCGAGTACCAGCCGTTGCAAGCGGTCCTTGACTTCGACGAAGCACTTGATGCGGGAGCGGTCGCTGCGCACCCCGGT TGGGCTACGAACGTGGTCGCCCGTGACGAGATCCATCGGGGCGATTTCGAAGCCGCCCTACGTTTGGCAGATGTGGTCGT TGCCGGGGAGCTTGAGTTCGCGCCGTCAACAGCCGCACCCATGGAACCATGCTGTTTTACGGGAGATTGGGACCCGGCAC TTGAACGCGTATCCCTGACCGGTACCCTGCAGAACCCTCACACAACCCGCTGGATGATCGCCACGGCGCTCAATATCCAA GAGACCGCCGTGCGCGTGGTCGCGCCACCGCTTGGCGGCTCATTTGGCTTAAAAATGGCGGGGCATCCTGAAGAGGTTCT TGTATGCGCCTTGGCGCGGTTTCTTAAGCGGCCGGTCAATTACACGGAAGAACGCTGGGAAACGCTGATGGCTCCTTGCC GCCGGCAGAAGCATAGGTTCCAGATCGCGGCGACACGCGACGGCAGGATTCTTGGCTTCGAAGACCAGTTTGTCGCAGAT GTCGGCATCACGGGGCCCGGCAATGGTTGGTCGATGCCGCTCGTTACGGCTACGGTCTTCCCGACGGTCTACGATGTGGA GCACTGCCGGATCTCCGCGACATTGATCGCGACCAATTCCACGCCTTGGCAACCTATCCGCGGGTATGGCAAGGAGATCG GTAACACTGTGATGGAGCGGGCCATCGATTTGCTCGCGGCACATCTCAGAATGGACCCGGTGGCCCTGCGGCACCTGAAC CTGATTGCGGCCGGCGATTTTCCGAAAAAACTTGCCTCCGGTCTCAATCTCGATAGCGGTGACTATCCGACCGCGCTCGA GAAGCTGACGAAGCTATTTGGCTACGACGCTTGGCGCCATCGGCAATCGAAGCAACGCCAATCGGAAAAGGTTATTGGCA TTGGCATCGCGTTCGAATTGACGCCTGAAGGAGGAGCTCGACCGGGTGCATTCCCCAGCGGATTTGAAACCGCTACCGTT AAGCTCCTTCCTGGCGGGAGCGTGCAGGTTCTGGTTGGGGTAACTTCACCCGGGAGCGGCAACGAAACTGGTATTGCCCA ACTCGTTGCGGCGGAACTGGGCGTCGATGCTAGATCCGTCCAAGTGGTGCAAGGGGATACTGACGTAACGCCTGTTGGTA CCGGACATGCAAGCAGCCGGGCGATGCTCTATGGTGGTACCGCGGCCGTTCTTGCCGCGCGCGATCTTCGTGCGAAGGTT TTGTTATGCGCTGCAAACATTCTTCGAGCGCCGACGGAAGGTCTCTCCCTAGAGGCGAGCATGATACGCGACAGTGAGGG GAATGGTGTCCTAACTCTTCAAGAAGTCTCCCACCAGGCGCATACCAATCCCATCATCGTGGCGAAGGGTACTGAACTGC CACTTGAAGCTACTCGCAGCTTTCAGCCCATCAATGTCAGCGTTATTCCCGATGAAAAGGGCCGCATCGCGACGTATTCT TCCTTCCCCTACTCGGTTCACGCAGCCGCCATCGAGCTCGATCGAGAGACTGGTTCGGTCAAGGTCTTGGACTACGCTTG CGTCCATGATTGCGGTGTGATGATCAACCCAATGCTGGTTACGGGGCAGCTAAAGGGCGCAATTGTCATGGGTATCGGAG CCGCCCTGTGGGAGGAGCTTGCCTATGATGATCAGAGAAGGCCGCTGGCACGTCGTCTTAAAGAATATCTTCTACCGCGT GCGATAGATCTGCCTGAAATCCGCGTAGGGCACATGAGTACGCCCAGCCCATATCATCCCCTCGGACTGAAGGGCGCAGG CGAGTCGGGGGTCGGTGGCGGTATTGCAGCGATGCTTTCCGCCGTCGCTGACGCTTTGGGGGAACGGCGCGCCGCGCTGA CACGCTGTCCCGCAACACCGCCAACACTTCTGGATATCCTGCATGATACCCAACCGTTTTGA
Upstream 100 bases:
>100_bases ATGGCTCTTGAGGTGGCGGACCATGTCTACGTCTTGCGGCGGGGTGGAATTGCCCTCAGCAAACCGCGATCCGAGATTGT AGACACGCAGGAAATCTTCG
Downstream 100 bases:
>100_bases CTACGCTGCGCCAAAGACGCTGGATGCGGCTCTCGAGCTTCTCTCTGGGCGAAACGATGCCAAAATTCTCGGCGGAGGCA CAGTGCTGGTGCCACTGATG
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 793; Mature: 792
Protein sequence:
>793_residues MPTLAEQSAVSSSIPRIDAHRYVSGKPVYTSDLLPAGCLHMALLRSPHPRARIVSLDVMKAKAAPDIVEVVTAVDLDDLK PIPAALPFRSDVEGRGTIVGRCLADGEVCYIGQPIAAVVATSVHSAQAALDLIEVEYQPLQAVLDFDEALDAGAVAAHPG WATNVVARDEIHRGDFEAALRLADVVVAGELEFAPSTAAPMEPCCFTGDWDPALERVSLTGTLQNPHTTRWMIATALNIQ ETAVRVVAPPLGGSFGLKMAGHPEEVLVCALARFLKRPVNYTEERWETLMAPCRRQKHRFQIAATRDGRILGFEDQFVAD VGITGPGNGWSMPLVTATVFPTVYDVEHCRISATLIATNSTPWQPIRGYGKEIGNTVMERAIDLLAAHLRMDPVALRHLN LIAAGDFPKKLASGLNLDSGDYPTALEKLTKLFGYDAWRHRQSKQRQSEKVIGIGIAFELTPEGGARPGAFPSGFETATV KLLPGGSVQVLVGVTSPGSGNETGIAQLVAAELGVDARSVQVVQGDTDVTPVGTGHASSRAMLYGGTAAVLAARDLRAKV LLCAANILRAPTEGLSLEASMIRDSEGNGVLTLQEVSHQAHTNPIIVAKGTELPLEATRSFQPINVSVIPDEKGRIATYS SFPYSVHAAAIELDRETGSVKVLDYACVHDCGVMINPMLVTGQLKGAIVMGIGAALWEELAYDDQRRPLARRLKEYLLPR AIDLPEIRVGHMSTPSPYHPLGLKGAGESGVGGGIAAMLSAVADALGERRAALTRCPATPPTLLDILHDTQPF
Sequences:
>Translated_793_residues MPTLAEQSAVSSSIPRIDAHRYVSGKPVYTSDLLPAGCLHMALLRSPHPRARIVSLDVMKAKAAPDIVEVVTAVDLDDLK PIPAALPFRSDVEGRGTIVGRCLADGEVCYIGQPIAAVVATSVHSAQAALDLIEVEYQPLQAVLDFDEALDAGAVAAHPG WATNVVARDEIHRGDFEAALRLADVVVAGELEFAPSTAAPMEPCCFTGDWDPALERVSLTGTLQNPHTTRWMIATALNIQ ETAVRVVAPPLGGSFGLKMAGHPEEVLVCALARFLKRPVNYTEERWETLMAPCRRQKHRFQIAATRDGRILGFEDQFVAD VGITGPGNGWSMPLVTATVFPTVYDVEHCRISATLIATNSTPWQPIRGYGKEIGNTVMERAIDLLAAHLRMDPVALRHLN LIAAGDFPKKLASGLNLDSGDYPTALEKLTKLFGYDAWRHRQSKQRQSEKVIGIGIAFELTPEGGARPGAFPSGFETATV KLLPGGSVQVLVGVTSPGSGNETGIAQLVAAELGVDARSVQVVQGDTDVTPVGTGHASSRAMLYGGTAAVLAARDLRAKV LLCAANILRAPTEGLSLEASMIRDSEGNGVLTLQEVSHQAHTNPIIVAKGTELPLEATRSFQPINVSVIPDEKGRIATYS SFPYSVHAAAIELDRETGSVKVLDYACVHDCGVMINPMLVTGQLKGAIVMGIGAALWEELAYDDQRRPLARRLKEYLLPR AIDLPEIRVGHMSTPSPYHPLGLKGAGESGVGGGIAAMLSAVADALGERRAALTRCPATPPTLLDILHDTQPF >Mature_792_residues PTLAEQSAVSSSIPRIDAHRYVSGKPVYTSDLLPAGCLHMALLRSPHPRARIVSLDVMKAKAAPDIVEVVTAVDLDDLKP IPAALPFRSDVEGRGTIVGRCLADGEVCYIGQPIAAVVATSVHSAQAALDLIEVEYQPLQAVLDFDEALDAGAVAAHPGW ATNVVARDEIHRGDFEAALRLADVVVAGELEFAPSTAAPMEPCCFTGDWDPALERVSLTGTLQNPHTTRWMIATALNIQE TAVRVVAPPLGGSFGLKMAGHPEEVLVCALARFLKRPVNYTEERWETLMAPCRRQKHRFQIAATRDGRILGFEDQFVADV GITGPGNGWSMPLVTATVFPTVYDVEHCRISATLIATNSTPWQPIRGYGKEIGNTVMERAIDLLAAHLRMDPVALRHLNL IAAGDFPKKLASGLNLDSGDYPTALEKLTKLFGYDAWRHRQSKQRQSEKVIGIGIAFELTPEGGARPGAFPSGFETATVK LLPGGSVQVLVGVTSPGSGNETGIAQLVAAELGVDARSVQVVQGDTDVTPVGTGHASSRAMLYGGTAAVLAARDLRAKVL LCAANILRAPTEGLSLEASMIRDSEGNGVLTLQEVSHQAHTNPIIVAKGTELPLEATRSFQPINVSVIPDEKGRIATYSS FPYSVHAAAIELDRETGSVKVLDYACVHDCGVMINPMLVTGQLKGAIVMGIGAALWEELAYDDQRRPLARRLKEYLLPRA IDLPEIRVGHMSTPSPYHPLGLKGAGESGVGGGIAAMLSAVADALGERRAALTRCPATPPTLLDILHDTQPF
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=794, Percent_Identity=22.6700251889169, Blast_Score=121, Evalue=3e-27, Organism=Homo sapiens, GI71773480, Length=806, Percent_Identity=22.3325062034739, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI1789246, Length=831, Percent_Identity=27.9181708784597, Blast_Score=235, Evalue=7e-63, Organism=Escherichia coli, GI1789230, Length=792, Percent_Identity=27.9040404040404, Blast_Score=216, Evalue=4e-57, Organism=Escherichia coli, GI1786478, Length=773, Percent_Identity=26.1319534282018, Blast_Score=112, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17539860, Length=783, Percent_Identity=21.3282247765006, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17540638, Length=735, Percent_Identity=23.5374149659864, Blast_Score=112, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32566215, Length=582, Percent_Identity=22.5085910652921, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI17737937, Length=772, Percent_Identity=24.0932642487047, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24647199, Length=751, Percent_Identity=23.1691078561917, Blast_Score=112, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84559; Mature: 84428
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLAEQSAVSSSIPRIDAHRYVSGKPVYTSDLLPAGCLHMALLRSPHPRARIVSLDVMK CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEHH AKAAPDIVEVVTAVDLDDLKPIPAALPFRSDVEGRGTIVGRCLADGEVCYIGQPIAAVVA HCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCHHHHHH TSVHSAQAALDLIEVEYQPLQAVLDFDEALDAGAVAAHPGWATNVVARDEIHRGDFEAAL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEECCCCCCCCHHHHH RLADVVVAGELEFAPSTAAPMEPCCFTGDWDPALERVSLTGTLQNPHTTRWMIATALNIQ HHHHEEEECCEEECCCCCCCCCCCEECCCCCHHHHEEEEEEECCCCCCCEEEEEEECCHH ETAVRVVAPPLGGSFGLKMAGHPEEVLVCALARFLKRPVNYTEERWETLMAPCRRQKHRF HHEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEE QIAATRDGRILGFEDQFVADVGITGPGNGWSMPLVTATVFPTVYDVEHCRISATLIATNS EEEEECCCEEECCCCCEEEEECCCCCCCCCCCCEEHHHHCCHHEECCCEEEEEEEEEECC TPWQPIRGYGKEIGNTVMERAIDLLAAHLRMDPVALRHLNLIAAGDFPKKLASGLNLDSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCHHHHHCCCCCCCC DYPTALEKLTKLFGYDAWRHRQSKQRQSEKVIGIGIAFELTPEGGARPGAFPSGFETATV CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEE KLLPGGSVQVLVGVTSPGSGNETGIAQLVAAELGVDARSVQVVQGDTDVTPVGTGHASSR EEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC AMLYGGTAAVLAARDLRAKVLLCAANILRAPTEGLSLEASMIRDSEGNGVLTLQEVSHQA EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEECCCCCCEEEHHHHHHHH HTNPIIVAKGTELPLEATRSFQPINVSVIPDEKGRIATYSSFPYSVHAAAIELDRETGSV CCCCEEEECCCCCCHHHHCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEEEECCCCCE KVLDYACVHDCGVMINPMLVTGQLKGAIVMGIGAALWEELAYDDQRRPLARRLKEYLLPR EEEEEHHHHHCCCEECCEEEEECCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC AIDLPEIRVGHMSTPSPYHPLGLKGAGESGVGGGIAAMLSAVADALGERRAALTRCPATP CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PTLLDILHDTQPF HHHHHHHHCCCCC >Mature Secondary Structure PTLAEQSAVSSSIPRIDAHRYVSGKPVYTSDLLPAGCLHMALLRSPHPRARIVSLDVMK CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEHH AKAAPDIVEVVTAVDLDDLKPIPAALPFRSDVEGRGTIVGRCLADGEVCYIGQPIAAVVA HCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCHHHHHH TSVHSAQAALDLIEVEYQPLQAVLDFDEALDAGAVAAHPGWATNVVARDEIHRGDFEAAL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEECCCCCCCCHHHHH RLADVVVAGELEFAPSTAAPMEPCCFTGDWDPALERVSLTGTLQNPHTTRWMIATALNIQ HHHHEEEECCEEECCCCCCCCCCCEECCCCCHHHHEEEEEEECCCCCCCEEEEEEECCHH ETAVRVVAPPLGGSFGLKMAGHPEEVLVCALARFLKRPVNYTEERWETLMAPCRRQKHRF HHEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEE QIAATRDGRILGFEDQFVADVGITGPGNGWSMPLVTATVFPTVYDVEHCRISATLIATNS EEEEECCCEEECCCCCEEEEECCCCCCCCCCCCEEHHHHCCHHEECCCEEEEEEEEEECC TPWQPIRGYGKEIGNTVMERAIDLLAAHLRMDPVALRHLNLIAAGDFPKKLASGLNLDSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCHHHHHCCCCCCCC DYPTALEKLTKLFGYDAWRHRQSKQRQSEKVIGIGIAFELTPEGGARPGAFPSGFETATV CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEE KLLPGGSVQVLVGVTSPGSGNETGIAQLVAAELGVDARSVQVVQGDTDVTPVGTGHASSR EEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC AMLYGGTAAVLAARDLRAKVLLCAANILRAPTEGLSLEASMIRDSEGNGVLTLQEVSHQA EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEECCCCCCEEEHHHHHHHH HTNPIIVAKGTELPLEATRSFQPINVSVIPDEKGRIATYSSFPYSVHAAAIELDRETGSV CCCCEEEECCCCCCHHHHCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEEEECCCCCE KVLDYACVHDCGVMINPMLVTGQLKGAIVMGIGAALWEELAYDDQRRPLARRLKEYLLPR EEEEEHHHHHCCCEECCEEEEECCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC AIDLPEIRVGHMSTPSPYHPLGLKGAGESGVGGGIAAMLSAVADALGERRAALTRCPATP CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PTLLDILHDTQPF HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]