| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632505
Identifier: 110632505
GI number: 110632505
Start: 178445
End: 179230
Strand: Reverse
Name: 110632505
Synonym: Meso_0143
Alternate gene names: NA
Gene position: 179230-178445 (Counterclockwise)
Preceding gene: 110632506
Following gene: 110632504
Centisome position: 4.06
GC content: 61.32
Gene sequence:
>786_bases ATGAGCATCAACGTATTGGTGTGGGGTGAAAATGTGCACGAGCAGCAAAGCGAGCTCGTGCGCTCGATCTATCCCGAAGG AATGCATACGACCATTGCCAGGGCCATTGGGGCCGAAGGTGATCTGTCGGTCAAAACAGTCGTCCTGCAGGACCCGGAAC ACGGGCTGACGGAGAAGGCGCTGAAGGAAACTGATGTGCTCGTCTGGTGGGGCCACAAGGCCCACCGCCAGGTTGAGGAC GAGATCGTCGAGCGCGTGGCGAAGCGCGTATGGGAAGGGATGGGCCTCATCCTGCTCCACTCGGCGCATTTCTCCAAGAT CTTCAAGCGTCTGATGGGTACGCCCTGCGCGCTGAAGTGGCGCGAGGCGGGTGAGCGCGAGCGCGTCTGGGTGGTCAATC CCGGCCACCCGATCGCGCAAGGCCTTCCGCAGTATTTCGAGCTGGAGCAAGAAGAGATGTATGGGGAGCCATTCTCCGTG CCGGAGCCGCTCGAGACTGTCTTCATCTCCTGGTTTCAGGGAGGAGAGGTTTTCCGCTCGGGCCTTACTTACCGCCGCGG CGCGGGCAATATCTTTTATTTCCGCCCCGGCCACGAGGCTTATCCCACCTATCACGACGCGATGGTGCACAAGGTGCTGA GGAACGCTGTGCGCTGGGCCTATTCGCCCGCGCCGGCCTACACCGCCATTCACGATGCGCCGAATGTGCCGGTGGAAAAA GCTCCCGAACCCATCACCGAGCGCGGGCCCAAATTGCACAAGCCCGGCGAAGCCGGCTTCAGATAG
Upstream 100 bases:
>100_bases GGCGCGTTCCATCAGGTGGCACGTTTGAACGAAGGAGCTCAGGGACCCAAGGCGGGGTGTCCTGCGCGCATGATCCAAAG AAAAGAAGAAAAGGGTGCTC
Downstream 100 bases:
>100_bases GACGACTTCCTATGCGTTTGCTCATACTTGGCACAGGCAAGATGGCCAATCAGCATGCCAACCGATTTGCGGCCATTCCC GGCGTGCACATCGTCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Trehalose Utilization-Related Protein; ThuA-Like Protein; Trehalosemaltose Utilization Protein; Sugar Uptake Related Protein; ThuA Protein; THUA Protein; Trehalose Utilization Protein Homolog
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSINVLVWGENVHEQQSELVRSIYPEGMHTTIARAIGAEGDLSVKTVVLQDPEHGLTEKALKETDVLVWWGHKAHRQVED EIVERVAKRVWEGMGLILLHSAHFSKIFKRLMGTPCALKWREAGERERVWVVNPGHPIAQGLPQYFELEQEEMYGEPFSV PEPLETVFISWFQGGEVFRSGLTYRRGAGNIFYFRPGHEAYPTYHDAMVHKVLRNAVRWAYSPAPAYTAIHDAPNVPVEK APEPITERGPKLHKPGEAGFR
Sequences:
>Translated_261_residues MSINVLVWGENVHEQQSELVRSIYPEGMHTTIARAIGAEGDLSVKTVVLQDPEHGLTEKALKETDVLVWWGHKAHRQVED EIVERVAKRVWEGMGLILLHSAHFSKIFKRLMGTPCALKWREAGERERVWVVNPGHPIAQGLPQYFELEQEEMYGEPFSV PEPLETVFISWFQGGEVFRSGLTYRRGAGNIFYFRPGHEAYPTYHDAMVHKVLRNAVRWAYSPAPAYTAIHDAPNVPVEK APEPITERGPKLHKPGEAGFR >Mature_260_residues SINVLVWGENVHEQQSELVRSIYPEGMHTTIARAIGAEGDLSVKTVVLQDPEHGLTEKALKETDVLVWWGHKAHRQVEDE IVERVAKRVWEGMGLILLHSAHFSKIFKRLMGTPCALKWREAGERERVWVVNPGHPIAQGLPQYFELEQEEMYGEPFSVP EPLETVFISWFQGGEVFRSGLTYRRGAGNIFYFRPGHEAYPTYHDAMVHKVLRNAVRWAYSPAPAYTAIHDAPNVPVEKA PEPITERGPKLHKPGEAGFR
Specific function: Unknown
COG id: COG4813
COG function: function code G; Trehalose utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29680; Mature: 29549
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINVLVWGENVHEQQSELVRSIYPEGMHTTIARAIGAEGDLSVKTVVLQDPEHGLTEKA CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH LKETDVLVWWGHKAHRQVEDEIVERVAKRVWEGMGLILLHSAHFSKIFKRLMGTPCALKW HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCEEEH REAGERERVWVVNPGHPIAQGLPQYFELEQEEMYGEPFSVPEPLETVFISWFQGGEVFRS HHCCCCCEEEEECCCCHHHHCCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH GLTYRRGAGNIFYFRPGHEAYPTYHDAMVHKVLRNAVRWAYSPAPAYTAIHDAPNVPVEK CCCEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCC APEPITERGPKLHKPGEAGFR CCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure SINVLVWGENVHEQQSELVRSIYPEGMHTTIARAIGAEGDLSVKTVVLQDPEHGLTEKA EEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH LKETDVLVWWGHKAHRQVEDEIVERVAKRVWEGMGLILLHSAHFSKIFKRLMGTPCALKW HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCEEEH REAGERERVWVVNPGHPIAQGLPQYFELEQEEMYGEPFSVPEPLETVFISWFQGGEVFRS HHCCCCCEEEEECCCCHHHHCCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH GLTYRRGAGNIFYFRPGHEAYPTYHDAMVHKVLRNAVRWAYSPAPAYTAIHDAPNVPVEK CCCEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCC APEPITERGPKLHKPGEAGFR CCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA