Click here to switch to the map view.

The map label for this gene is ywoF [H]

Identifier: 110632461

GI number: 110632461

Start: 129647

End: 131209

Strand: Direct

Name: ywoF [H]

Synonym: Meso_0099

Alternate gene names: 110632461

Gene position: 129647-131209 (Clockwise)

Preceding gene: 110632460

Following gene: 110632462

Centisome position: 2.94

GC content: 59.12

Gene sequence:

>1563_bases
ATGGACAAGGCCGTCGATGTTCGCGTCACGGCAGCGTTGAAAGGGGATGCAGCGCTGCTGGTGACGCGCGCAGTCTGCAA
CGCGGTCTACACCCGGCCGGGAAGAACCCTGCACGTTGCCCCCGGCGGCTCCGACCTGAATGCGGGCACGGCCGCATCCC
CCTGGGGCACCATTCAGCATGCAGTCGATCAGGCGCAGCCGGGCGACACGATCCTCGTCCATGGCGGCGTCTATAACGAA
ACCGTACAGATCACGCGCTCCGGTTCCGCGGAAGGCGGCTTCATCACTTTGATGGAAGCGCCGGGCGAGACCGCGGTGAT
CGATGGCGCCGGCCTAGTCCAGCAGCCCTATGGAACGCGCGGCTTGATAACACTTTCCGGTGCCAGCTATGTCCGTGTCA
AGGATTTCGAGCTTCGCAACTACAAATCGGAAAGCGAGTTCATCGTGGTTGGTGTGCTCGTGCGAGGTTCAGGTGAGCGC
ATCGAGATACGCGACAATGTCATTCACGAGATCGAGGCCAACAATCCTCCCTCGCGCGGCAATGCCAACGCGCTGGGCAT
AGCGGTTTACGGCGAGGAGACCTCGCCGATCCGCAATGTGATCATAGACGGGAACGAGCTTTTTCACCTCAAAACCGGCA
GGAGTGAAGCGCTCACGGTCGGCGGCAATGTGGAAGGCTGGCAGATCACCAACAATCTTGTCCGCGACAATGATTTCATC
GGAATAGATGCGATCGGATATTACATCGACGGCACCGAGCGGGATCGGGCTCGCCAGGGATGGATCGCCGGAAACACCGT
GCGTAACCTTTCCAGCGCCGGTAATCAGGCCCTGACCTTCCAGGCGGCAGCCGTCGGTATTTATGTGGATGGCGGGCGCG
ACATCACCATCGAGCGAAACACAGTCGAAGCAAATGACGGCGGCATCTGGTTGTTGAGCGAACGTCCCGGCAAGAACACC
AGTAATGTCGTTGCTCGAAACAATCTGGTGCGTTTCAACCGCGATGCCGGCATTCTGGTGGGCGGCTATGACGAAAGCCA
GTCCGGCGGAGCGGAGGACGTAACGATCATCAACAACACCCTATTGGAAAACAACGGCCGCGATGTTCCGGGCATTCATT
CAGGCGAGTTCCAGATCGGCCATAACGCGCATGGTATTCGCTTCCTGAACAATATCCTCTACGCGGGCGAGAAGGGTTAC
GTGATCACAAAATTCTCTCCAGCCGATTCAAGCTCAATCGCGATAGGGCACAATCTCTATTTCACCTCCGCGGGTGGCGA
GCATACGCGCTGGTTCTGGATCGACCGCAACTTTTATAACGACGGCAGGCCCGGCGGCGATTTTGAAGCATTTAGATCCG
CCAGCGGCGACGTCGGCAGCGCCGTCGAAGACCCCGACTTCCGGGACCTTGCGATGCAGGATTTGCGCCCCGGTTCGAAT
TCGCCGGCAATCGACAGCGGTTCGGATTTGGGACCTGCCGCTACGGGCCTATGGGATAATGTCATGGGCACTCGGGTGAT
GGGCTCAGCCATCGACCGAGGTGCGTTCGAAATGGCCGACTGA

Upstream 100 bases:

>100_bases
GGCAAGTGATGAGGTGGTGTGGATGGTCGATGGCGTTGCGGGAGGAGCGCCCGAAATTGGAACAATAACCGGTCAGGGCC
TCTACACCGCGCCGGCTAAC

Downstream 100 bases:

>100_bases
GTAGACGGGTACCTCCCGGTCTCTCGACACTGGGTCTGCCGCCTATAGCACTGAAGCTTTCTACAGCGGTGCTTGCAATG
CCGGGCAACATCTGCCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MDKAVDVRVTAALKGDAALLVTRAVCNAVYTRPGRTLHVAPGGSDLNAGTAASPWGTIQHAVDQAQPGDTILVHGGVYNE
TVQITRSGSAEGGFITLMEAPGETAVIDGAGLVQQPYGTRGLITLSGASYVRVKDFELRNYKSESEFIVVGVLVRGSGER
IEIRDNVIHEIEANNPPSRGNANALGIAVYGEETSPIRNVIIDGNELFHLKTGRSEALTVGGNVEGWQITNNLVRDNDFI
GIDAIGYYIDGTERDRARQGWIAGNTVRNLSSAGNQALTFQAAAVGIYVDGGRDITIERNTVEANDGGIWLLSERPGKNT
SNVVARNNLVRFNRDAGILVGGYDESQSGGAEDVTIINNTLLENNGRDVPGIHSGEFQIGHNAHGIRFLNNILYAGEKGY
VITKFSPADSSSIAIGHNLYFTSAGGEHTRWFWIDRNFYNDGRPGGDFEAFRSASGDVGSAVEDPDFRDLAMQDLRPGSN
SPAIDSGSDLGPAATGLWDNVMGTRVMGSAIDRGAFEMAD

Sequences:

>Translated_520_residues
MDKAVDVRVTAALKGDAALLVTRAVCNAVYTRPGRTLHVAPGGSDLNAGTAASPWGTIQHAVDQAQPGDTILVHGGVYNE
TVQITRSGSAEGGFITLMEAPGETAVIDGAGLVQQPYGTRGLITLSGASYVRVKDFELRNYKSESEFIVVGVLVRGSGER
IEIRDNVIHEIEANNPPSRGNANALGIAVYGEETSPIRNVIIDGNELFHLKTGRSEALTVGGNVEGWQITNNLVRDNDFI
GIDAIGYYIDGTERDRARQGWIAGNTVRNLSSAGNQALTFQAAAVGIYVDGGRDITIERNTVEANDGGIWLLSERPGKNT
SNVVARNNLVRFNRDAGILVGGYDESQSGGAEDVTIINNTLLENNGRDVPGIHSGEFQIGHNAHGIRFLNNILYAGEKGY
VITKFSPADSSSIAIGHNLYFTSAGGEHTRWFWIDRNFYNDGRPGGDFEAFRSASGDVGSAVEDPDFRDLAMQDLRPGSN
SPAIDSGSDLGPAATGLWDNVMGTRVMGSAIDRGAFEMAD
>Mature_520_residues
MDKAVDVRVTAALKGDAALLVTRAVCNAVYTRPGRTLHVAPGGSDLNAGTAASPWGTIQHAVDQAQPGDTILVHGGVYNE
TVQITRSGSAEGGFITLMEAPGETAVIDGAGLVQQPYGTRGLITLSGASYVRVKDFELRNYKSESEFIVVGVLVRGSGER
IEIRDNVIHEIEANNPPSRGNANALGIAVYGEETSPIRNVIIDGNELFHLKTGRSEALTVGGNVEGWQITNNLVRDNDFI
GIDAIGYYIDGTERDRARQGWIAGNTVRNLSSAGNQALTFQAAAVGIYVDGGRDITIERNTVEANDGGIWLLSERPGKNT
SNVVARNNLVRFNRDAGILVGGYDESQSGGAEDVTIINNTLLENNGRDVPGIHSGEFQIGHNAHGIRFLNNILYAGEKGY
VITKFSPADSSSIAIGHNLYFTSAGGEHTRWFWIDRNFYNDGRPGGDFEAFRSASGDVGSAVEDPDFRDLAMQDLRPGSN
SPAIDSGSDLGPAATGLWDNVMGTRVMGSAIDRGAFEMAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR011459
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF07602 DUF1565 [H]

EC number: NA

Molecular weight: Translated: 55428; Mature: 55428

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKAVDVRVTAALKGDAALLVTRAVCNAVYTRPGRTLHVAPGGSDLNAGTAASPWGTIQH
CCCCEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHH
AVDQAQPGDTILVHGGVYNETVQITRSGSAEGGFITLMEAPGETAVIDGAGLVQQPYGTR
HHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEECCCCCC
GLITLSGASYVRVKDFELRNYKSESEFIVVGVLVRGSGERIEIRDNVIHEIEANNPPSRG
EEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCC
NANALGIAVYGEETSPIRNVIIDGNELFHLKTGRSEALTVGGNVEGWQITNNLVRDNDFI
CCCEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCEEEECCEECCCCEE
GIDAIGYYIDGTERDRARQGWIAGNTVRNLSSAGNQALTFQAAAVGIYVDGGRDITIERN
EEEEEEEEECCCCCCHHHCCCEECCHHHHHHHCCCEEEEEEEEEEEEEEECCEEEEEECC
TVEANDGGIWLLSERPGKNTSNVVARNNLVRFNRDAGILVGGYDESQSGGAEDVTIINNT
EEEECCCCEEEEECCCCCCCCCEEEECCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEE
LLENNGRDVPGIHSGEFQIGHNAHGIRFLNNILYAGEKGYVITKFSPADSSSIAIGHNLY
EECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEE
FTSAGGEHTRWFWIDRNFYNDGRPGGDFEAFRSASGDVGSAVEDPDFRDLAMQDLRPGSN
EECCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC
SPAIDSGSDLGPAATGLWDNVMGTRVMGSAIDRGAFEMAD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MDKAVDVRVTAALKGDAALLVTRAVCNAVYTRPGRTLHVAPGGSDLNAGTAASPWGTIQH
CCCCEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHH
AVDQAQPGDTILVHGGVYNETVQITRSGSAEGGFITLMEAPGETAVIDGAGLVQQPYGTR
HHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEECCCCCC
GLITLSGASYVRVKDFELRNYKSESEFIVVGVLVRGSGERIEIRDNVIHEIEANNPPSRG
EEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCC
NANALGIAVYGEETSPIRNVIIDGNELFHLKTGRSEALTVGGNVEGWQITNNLVRDNDFI
CCCEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCEEEECCEECCCCEE
GIDAIGYYIDGTERDRARQGWIAGNTVRNLSSAGNQALTFQAAAVGIYVDGGRDITIERN
EEEEEEEEECCCCCCHHHCCCEECCHHHHHHHCCCEEEEEEEEEEEEEEECCEEEEEECC
TVEANDGGIWLLSERPGKNTSNVVARNNLVRFNRDAGILVGGYDESQSGGAEDVTIINNT
EEEECCCCEEEEECCCCCCCCCEEEECCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEE
LLENNGRDVPGIHSGEFQIGHNAHGIRFLNNILYAGEKGYVITKFSPADSSSIAIGHNLY
EECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEE
FTSAGGEHTRWFWIDRNFYNDGRPGGDFEAFRSASGDVGSAVEDPDFRDLAMQDLRPGSN
EECCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCC
SPAIDSGSDLGPAATGLWDNVMGTRVMGSAIDRGAFEMAD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]