| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is punB
Identifier: 109948252
GI number: 109948252
Start: 1553241
End: 1553786
Strand: Reverse
Name: punB
Synonym: Hac_1789
Alternate gene names: NA
Gene position: 1553786-1553241 (Counterclockwise)
Preceding gene: NA
Following gene: 109948251
Centisome position: 99.99
GC content: 37.91
Gene sequence:
>546_bases ATGCTGCTTTGCGCTGGAAGAAATGAAGCTTTAAAAGGAGCGGTACCTATTGGTGTGGGTTTGATAGAAAGCGCGATAAA CCTAACGAGAATATGCTTAAAAAACCCTAGTATAGAGAGCGTTATTTTTATAGGGAGCGCGGGGAGTTATAGCCTAGAAA TTGAGCTTTTAAGCGTGTTTGAAAGTACTCAAGGCTATCAAATTGAAGAGAGTTTTAGCCATCTAAATAGCTACACGCCT TTAGACAATTTCATTCAAATAGAAACTAAAGAGAAGGCGCTTTTTAAAAGGGCGCGTGTGAATAGCAGTAACTATATCCA TACAAACGAAATGTTTGCTGCAAAAATGGTTCAAAAGGGCGCTTTATTAGAAAACATGGAGTTTTTTAGCGTTTTGAGCG TGGCTAAAACTTTTTCTTTAAAGGCTAAAGGGATTTTTTGCGTGAGTAATCATGTGGGGCTTAATGCACGCAAGGAATTT AAGGAAAACCACGCCAAAGTCAAACAAGTTTTAGAAAACACGATTGATAGTTTAGCTATCATGTAG
Upstream 100 bases:
>100_bases AGACATGTGAATGAAATGTGAATGAAGCCTTAAATTAAGGTATTTTTTTAAAGGTTTGTCTATAATGCTTACTTCAATAA TAAGCGAAAAAAGGATTTTC
Downstream 100 bases:
>100_bases CATTCTAAATTAAAGGCAATCAAATGTTTGAAAAAATGCGCAAGATTTTAGCGGATATTGAAGATTCGCAAAATGAAATT GAAATGCTTTTAAAATTAGC
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Bacterioferritin Comigratory Protein Bcp; Purine Or Other Phosphorylase Family 1 Protein
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLLCAGRNEALKGAVPIGVGLIESAINLTRICLKNPSIESVIFIGSAGSYSLEIELLSVFESTQGYQIEESFSHLNSYTP LDNFIQIETKEKALFKRARVNSSNYIHTNEMFAAKMVQKGALLENMEFFSVLSVAKTFSLKAKGIFCVSNHVGLNARKEF KENHAKVKQVLENTIDSLAIM
Sequences:
>Translated_181_residues MLLCAGRNEALKGAVPIGVGLIESAINLTRICLKNPSIESVIFIGSAGSYSLEIELLSVFESTQGYQIEESFSHLNSYTP LDNFIQIETKEKALFKRARVNSSNYIHTNEMFAAKMVQKGALLENMEFFSVLSVAKTFSLKAKGIFCVSNHVGLNARKEF KENHAKVKQVLENTIDSLAIM >Mature_181_residues MLLCAGRNEALKGAVPIGVGLIESAINLTRICLKNPSIESVIFIGSAGSYSLEIELLSVFESTQGYQIEESFSHLNSYTP LDNFIQIETKEKALFKRARVNSSNYIHTNEMFAAKMVQKGALLENMEFFSVLSVAKTFSLKAKGIFCVSNHVGLNARKEF KENHAKVKQVLENTIDSLAIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20039; Mature: 20039
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCAGRNEALKGAVPIGVGLIESAINLTRICLKNPSIESVIFIGSAGSYSLEIELLSVF CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEHEEHH ESTQGYQIEESFSHLNSYTPLDNFIQIETKEKALFKRARVNSSNYIHTNEMFAAKMVQKG HCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCCEEECHHHHHHHHHHHC ALLENMEFFSVLSVAKTFSLKAKGIFCVSNHVGLNARKEFKENHAKVKQVLENTIDSLAI HHHHHHHHHHHHHHHHHHCEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC M C >Mature Secondary Structure MLLCAGRNEALKGAVPIGVGLIESAINLTRICLKNPSIESVIFIGSAGSYSLEIELLSVF CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEHEEHH ESTQGYQIEESFSHLNSYTPLDNFIQIETKEKALFKRARVNSSNYIHTNEMFAAKMVQKG HCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCCEEECHHHHHHHHHHHC ALLENMEFFSVLSVAKTFSLKAKGIFCVSNHVGLNARKEFKENHAKVKQVLENTIDSLAI HHHHHHHHHHHHHHHHHHCEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC M C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA