| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is flgA
Identifier: 109948204
GI number: 109948204
Start: 1510765
End: 1511421
Strand: Reverse
Name: flgA
Synonym: Hac_1737
Alternate gene names: NA
Gene position: 1511421-1510765 (Counterclockwise)
Preceding gene: 109948205
Following gene: 109948203
Centisome position: 97.26
GC content: 35.01
Gene sequence:
>657_bases TTGAAAATTTTCATTCTTTTTTTCATGGCTTTAAACGCGCTATTGGCTATGGATACTAATACGCTTAAAACAGAGATTAA AGCAATTTATCTTAAAGAATACAAAGATTTAAAACTAGAAATTGAAAATATCCATTTAGAAATCCCGGAGCGTTTTTCTA ATTCTTTCATTATAAGCTATGAATTAAACCCCTCCAACAAGCTTAAAAAAGATGGGGTCGTGTTTTTAAGATTGGAAAAT GAGCCTAATTTACGCCTACCGGTGCGTTATAGCGTGATAGGGAGCATGCAAGCTTTTAAAAGCACCAACACAATTAAAAA AGATGAAAACATCACCGCTAACAACACTAAAAAAGAGCGCATTGCTTTTGGCGCGCTTTCTAACCCTTTATTAGAGAGCG CGATTGATAAAGTGAGCGCGAAAGTCTTCATCGCTGCTGATACGCTTTTAAACACAGACAAAACCCAAGATTTAATCATT GTGCGTAAAAATGACATCATCACCGGAGTGTATGAAGAAGGGCGTATCAGCATAGAAATAAGCCTAAAAGCCCTAGAAAA TGGCTCGCTCAATCAAATCATTCAAGCGAAAAATTTAGAAAGCAATAAAATCTTAAAAGCAAAAGTGTTAAGCAGTTCTA AAGTTCAAATCTTATAA
Upstream 100 bases:
>100_bases TAGAAAAAGGCTTGAGCGGTTTGTGTTTTAAAATCAATTGCGGGGGGAATGTCTATGATAAAATTTCAGAAAAATTTGTA GAAAAAGTGGGTAGCGGATT
Downstream 100 bases:
>100_bases AGGATCATCATGAAATTAGTTTTAGGCATCAGCGGGGCGAGTGGAATCCCCCTAGCCTTGCGGTTTTTGGAAAAATTACC CCAAGAAATTGAAGCGTTTG
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellum Ring Component
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKIFILFFMALNALLAMDTNTLKTEIKAIYLKEYKDLKLEIENIHLEIPERFSNSFIISYELNPSNKLKKDGVVFLRLEN EPNLRLPVRYSVIGSMQAFKSTNTIKKDENITANNTKKERIAFGALSNPLLESAIDKVSAKVFIAADTLLNTDKTQDLII VRKNDIITGVYEEGRISIEISLKALENGSLNQIIQAKNLESNKILKAKVLSSSKVQIL
Sequences:
>Translated_218_residues MKIFILFFMALNALLAMDTNTLKTEIKAIYLKEYKDLKLEIENIHLEIPERFSNSFIISYELNPSNKLKKDGVVFLRLEN EPNLRLPVRYSVIGSMQAFKSTNTIKKDENITANNTKKERIAFGALSNPLLESAIDKVSAKVFIAADTLLNTDKTQDLII VRKNDIITGVYEEGRISIEISLKALENGSLNQIIQAKNLESNKILKAKVLSSSKVQIL >Mature_218_residues MKIFILFFMALNALLAMDTNTLKTEIKAIYLKEYKDLKLEIENIHLEIPERFSNSFIISYELNPSNKLKKDGVVFLRLEN EPNLRLPVRYSVIGSMQAFKSTNTIKKDENITANNTKKERIAFGALSNPLLESAIDKVSAKVFIAADTLLNTDKTQDLII VRKNDIITGVYEEGRISIEISLKALENGSLNQIIQAKNLESNKILKAKVLSSSKVQIL
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24618; Mature: 24618
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFILFFMALNALLAMDTNTLKTEIKAIYLKEYKDLKLEIENIHLEIPERFSNSFIISY CEEEEEEHHHHHHHHHCCCCHHHHHHEEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEE ELNPSNKLKKDGVVFLRLENEPNLRLPVRYSVIGSMQAFKSTNTIKKDENITANNTKKER EECCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE IAFGALSNPLLESAIDKVSAKVFIAADTLLNTDKTQDLIIVRKNDIITGVYEEGRISIEI EEECCCCCHHHHHHHHHHCEEEEEEEEEEECCCCCCCEEEEECCCEEEEEECCCEEEEEE SLKALENGSLNQIIQAKNLESNKILKAKVLSSSKVQIL EEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEC >Mature Secondary Structure MKIFILFFMALNALLAMDTNTLKTEIKAIYLKEYKDLKLEIENIHLEIPERFSNSFIISY CEEEEEEHHHHHHHHHCCCCHHHHHHEEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEE ELNPSNKLKKDGVVFLRLENEPNLRLPVRYSVIGSMQAFKSTNTIKKDENITANNTKKER EECCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE IAFGALSNPLLESAIDKVSAKVFIAADTLLNTDKTQDLIIVRKNDIITGVYEEGRISIEI EEECCCCCHHHHHHHHHHCEEEEEEEEEEECCCCCCCEEEEECCCEEEEEECCCEEEEEE SLKALENGSLNQIIQAKNLESNKILKAKVLSSSKVQIL EEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA