| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109948200
Identifier: 109948200
GI number: 109948200
Start: 1508579
End: 1509154
Strand: Reverse
Name: 109948200
Synonym: Hac_1733
Alternate gene names: NA
Gene position: 1509154-1508579 (Counterclockwise)
Preceding gene: 109948201
Following gene: 109948199
Centisome position: 97.12
GC content: 41.32
Gene sequence:
>576_bases ATGCGTTGTTTAACTTGTTTAAGGCTCTCTTTCAAGCCCCTTTGCCAGAATTGCTTGAACGATTTGCCCTTAAGCTTAAA AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAATTGATTAAAAGCAAATACG CGCTGATTGGCTCTCGCGTTTTGCCCTTGCTTTCTCAAAAAGTGGGCGCAAAGTTTGTGAAAATCTTACAAGAAAAAGGC TTGAACGCCCCCCTTTATGGCATCGCTATTGATGATAAGATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG CTTTTGTCAAGGCAATTTAAAGCCCGCTTACGGGAATTTAAGGGCGACTAATTCTGTTTCGTATGCCGGGAAAAGCCTAG AATTTCGCGCCAATAACCCTAGGAATTTCACTTTCAAAGGCGATGGATTTTTAGATTATTTCTTGTTGGATGATATTATC ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATATCTTAAAACTCTCAATATTAAAGCGCATTTTGCGATCGCGCTTTG CAGCGCGGATGAATGA
Upstream 100 bases:
>100_bases ATGCTTATGCTTTAAAAGAACAATTTGGGTGCGAGGTTTTGGAATTAAACGCTAAAGAAAACGCCAAAAATTTGCATGAG CGAATCAGCGCCTTTATCCA
Downstream 100 bases:
>100_bases GTTATAATTCTATTTTCTAAAAGGATGAAAACATGCCAGCTTTTAAGCTAGAAGATGATGTTAATGACTATGTTAAAAAA GAATTGACAAATTTAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoribosyltransferase; Purine/Pyrimidine Phosphoribosyltransferase; Transformation Protein; Amidophosphoribosyltransferase
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRVLPLLSQKVGAKFVKILQEKG LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNLRATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDII TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Sequences:
>Translated_191_residues MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRVLPLLSQKVGAKFVKILQEKG LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNLRATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDII TTGTTLKEALKYLKTLNIKAHFAIALCSADE >Mature_191_residues MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRVLPLLSQKVGAKFVKILQEKG LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNLRATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDII TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21253; Mature: 21253
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRV CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPLLSQKVGAKFVKILQEKGLNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNL HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDIITTGTTLKEALKYLKTLNIKA CCCCCHHHCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE HFAIALCSADE EEEEEEECCCC >Mature Secondary Structure MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRV CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPLLSQKVGAKFVKILQEKGLNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNL HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDIITTGTTLKEALKYLKTLNIKA CCCCCHHHCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE HFAIALCSADE EEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA