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The map label for this gene is yrbE [C]

Identifier: 109948194

GI number: 109948194

Start: 1501482

End: 1502615

Strand: Reverse

Name: yrbE [C]

Synonym: Hac_1727

Alternate gene names: 109948194

Gene position: 1502615-1501482 (Counterclockwise)

Preceding gene: 109948196

Following gene: 109948193

Centisome position: 96.7

GC content: 42.5

Gene sequence:

>1134_bases
ATGGAAACAGAGAAACAAGAATTTTTAGAGATGCGTAAAGATGGATCTGGCTCTGTGCTGATTTTAGGGGGGGATTGGGA
TTTTAGAACGAGCGTGTTTCTTTTAGATGAGCTTAAAAAAACCCTATCCAACCATCAAGGGCGTTTGAAAATGGATTTTT
CAAGGTGCCAAAAAGTGGATTTTGTTTTTGGCATGTTCTTGTTTGATCTCATTAAAGAGCGCTCTTTAAACATTGAGTTG
TGCAATGTGAGCGAGAGTAACGCCTGCGCTTTAAAGGTGGTCAGGGACTGGCTTGAAAAAGATGGAAATATTGAGTCTCA
AAAAACGATCAAAAAATACGAACTTGTGGTCACTAAAATGGGCAAAAGCATTGTAGAGACTTACAACACCTTTTTAAACG
CACTCAATTTTTGTGGCATGATTTTATTCTACTTCATTAAAGGGGTTTTTAACCCCAAGCGTTTTTGCTTCACCCCATTA
GTTTATCACATCAATGAATCTGGGTTTAAGGTTTTGCCGGTGAGCATTTTAACGGTGTTTATCGTAGGCTTTGCGATCAC
TTTGCAAGGGGCTTTGCAATTGCAAGATATGGGCGTGCCTTTAACGACGGTTGAAATGACAGCCAAGCTCGCTTTAAGAG
AGATCGGCCCTTTTATTTTGACCCTCGTGGTTGCCGGAAGGAGCGCGAGCAGTTTTACCGCGCAAATTGGGGTAATGAAA
ATCACTGAGGAATTGGATGCGATGAAAACCATGGGCTTTAACCCTTTTGAGTTTTTGGTGTTGCCTAGGGTGTTAGCTTT
AATCATTGTGCTGCCTTTAATGGTGTTTATTGCCGATGCGATCGCTATTTTAGGGAGCATGTGCGCGGTCAAATACCAAT
TGGATCTAACCTTTTCAAGCTATGTGGATAGGTTCCATAGCACGGTGACTTGGAATCATTTCTGGGTAGGGATTATCAAA
GCGCCTTTTTGGGGGTTTGCGATTGCGGTAGTAGGGTGCATGCGTGGGTTTGAAGTCAGGGGGGATACTGAAAGCGTGGG
GCGTTTGACCACTATTAGCGTGGTGAATGCCTTGTTTTGGATCATCTTCTTAAACGCCACCTTTTCTATTGTCTTTTCTC
GATTGGGTATATGA

Upstream 100 bases:

>100_bases
AGGTTGTTTAATTGTTTAACTTATCATTGCGCTAAAATAATTTTAACAAACTAAAATTGATTAACAGATTTTACCTAATC
TATAGAGAGAATGTATTTTA

Downstream 100 bases:

>100_bases
TGGCCGTTATTCAAAATCAAGCGTTGATTGAAGTGAAAGATCTCCATAACGCTTTTGGGAGCACCGTTATTCATAAAGGC
GTGAGTTTTAGCGTGCATAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
METEKQEFLEMRKDGSGSVLILGGDWDFRTSVFLLDELKKTLSNHQGRLKMDFSRCQKVDFVFGMFLFDLIKERSLNIEL
CNVSESNACALKVVRDWLEKDGNIESQKTIKKYELVVTKMGKSIVETYNTFLNALNFCGMILFYFIKGVFNPKRFCFTPL
VYHINESGFKVLPVSILTVFIVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFHSTVTWNHFWVGIIK
APFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNATFSIVFSRLGI

Sequences:

>Translated_377_residues
METEKQEFLEMRKDGSGSVLILGGDWDFRTSVFLLDELKKTLSNHQGRLKMDFSRCQKVDFVFGMFLFDLIKERSLNIEL
CNVSESNACALKVVRDWLEKDGNIESQKTIKKYELVVTKMGKSIVETYNTFLNALNFCGMILFYFIKGVFNPKRFCFTPL
VYHINESGFKVLPVSILTVFIVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFHSTVTWNHFWVGIIK
APFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNATFSIVFSRLGI
>Mature_377_residues
METEKQEFLEMRKDGSGSVLILGGDWDFRTSVFLLDELKKTLSNHQGRLKMDFSRCQKVDFVFGMFLFDLIKERSLNIEL
CNVSESNACALKVVRDWLEKDGNIESQKTIKKYELVVTKMGKSIVETYNTFLNALNFCGMILFYFIKGVFNPKRFCFTPL
VYHINESGFKVLPVSILTVFIVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFHSTVTWNHFWVGIIK
APFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNATFSIVFSRLGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=245, Percent_Identity=27.7551020408163, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 42444; Mature: 42444

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEKQEFLEMRKDGSGSVLILGGDWDFRTSVFLLDELKKTLSNHQGRLKMDFSRCQKVD
CCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH
FVFGMFLFDLIKERSLNIELCNVSESNACALKVVRDWLEKDGNIESQKTIKKYELVVTKM
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GKSIVETYNTFLNALNFCGMILFYFIKGVFNPKRFCFTPLVYHINESGFKVLPVSILTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEHHHHHHHHH
IVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHH
YVDRFHSTVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFW
HHHHHHCCEEECCEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IIFLNATFSIVFSRLGI
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METEKQEFLEMRKDGSGSVLILGGDWDFRTSVFLLDELKKTLSNHQGRLKMDFSRCQKVD
CCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH
FVFGMFLFDLIKERSLNIELCNVSESNACALKVVRDWLEKDGNIESQKTIKKYELVVTKM
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GKSIVETYNTFLNALNFCGMILFYFIKGVFNPKRFCFTPLVYHINESGFKVLPVSILTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEHHHHHHHHH
IVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHH
YVDRFHSTVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFW
HHHHHHCCEEECCEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
IIFLNATFSIVFSRLGI
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA