Click here to switch to the map view.

The map label for this gene is 109948177

Identifier: 109948177

GI number: 109948177

Start: 1483875

End: 1484366

Strand: Reverse

Name: 109948177

Synonym: Hac_1708

Alternate gene names: NA

Gene position: 1484366-1483875 (Counterclockwise)

Preceding gene: 109948178

Following gene: 109948176

Centisome position: 95.52

GC content: 40.45

Gene sequence:

>492_bases
ATGGATACTGCAAGAGAGAACTTGAATGGCTCAAAAGAGCGTTTGAGTTATACTGAATACAGTATAGCAATGGGTTTGGT
CGCTATAGTGTGTTACTCCATAGTTTTTAGAACAGCTCTTTATCGCCCAGATGTTAGCGATCCGATCTTTAACCCTAAAG
ACAGCTATTATGTGTGGCTAACGACTCTAATAGCGGCTTTATTGTCTAATCTCTTGTTTAATCCGCAAGGCAGGGGTTGT
TATGAATTGCAAGTAAGATACCCTAGGTTTCTCAAATCCATTTTTAAGGCTAGGTTTTTTGGTGCGTTATATGACGCTGT
GCTAGGAGCAAGATTGAGAGACTTTTATATAGTGCTTTTAACGATGCCCTTTTGTATCGCTATGCATGAAATTTCAGCGT
ATTGTGGGCATCCTAGCAACTTTCTTGTAGAGGCTTTGGCCGTTTTGGGGTTTCTATATTTTCTTAGGCTTTGCGCTAAA
TTGGGGTGGTGA

Upstream 100 bases:

>100_bases
CCCAAGAGAACCTATCCGTGATTTTTATGATTACGGCTATAGTTTTGGGCATGCTAGGTAATCTTAAATGAGCCAAGGTG
ATGAGGCGAAAGGAAATAAC

Downstream 100 bases:

>100_bases
GTTTAACTTGAAGTAACCAAATGGAGGGGAATAAGAGTATTAAAGAAATTTGAAGAGTTGGTTTTCATTGGTTTTTTGCA
ACAAAGAGCGTTTAAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDTARENLNGSKERLSYTEYSIAMGLVAIVCYSIVFRTALYRPDVSDPIFNPKDSYYVWLTTLIAALLSNLLFNPQGRGC
YELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLLTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAK
LGW

Sequences:

>Translated_163_residues
MDTARENLNGSKERLSYTEYSIAMGLVAIVCYSIVFRTALYRPDVSDPIFNPKDSYYVWLTTLIAALLSNLLFNPQGRGC
YELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLLTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAK
LGW
>Mature_163_residues
MDTARENLNGSKERLSYTEYSIAMGLVAIVCYSIVFRTALYRPDVSDPIFNPKDSYYVWLTTLIAALLSNLLFNPQGRGC
YELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLLTMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAK
LGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18657; Mature: 18657

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTARENLNGSKERLSYTEYSIAMGLVAIVCYSIVFRTALYRPDVSDPIFNPKDSYYVWL
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
TTLIAALLSNLLFNPQGRGCYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLL
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAKLGW
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTARENLNGSKERLSYTEYSIAMGLVAIVCYSIVFRTALYRPDVSDPIFNPKDSYYVWL
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
TTLIAALLSNLLFNPQGRGCYELQVRYPRFLKSIFKARFFGALYDAVLGARLRDFYIVLL
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMPFCIAMHEISAYCGHPSNFLVEALAVLGFLYFLRLCAKLGW
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA