| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is engB
Identifier: 109948148
GI number: 109948148
Start: 1457640
End: 1458266
Strand: Reverse
Name: engB
Synonym: Hac_1674
Alternate gene names: 109948148
Gene position: 1458266-1457640 (Counterclockwise)
Preceding gene: 109948149
Following gene: 109948147
Centisome position: 93.84
GC content: 37.8
Gene sequence:
>627_bases ATGATTATTATTAAAGACGCCCATTTCATCACTTCTTCAAGTCAACTTTCACAATGCCCTGCGAGCCTGACTTCTGAAAT GGTGGTTTTAGGGCGTAGCAATGTGGGCAAAAGCTCATTCATTAACACTTTATTAGGAAAAAATCTGGCTAAAAGCTCAT CAACGCCTGGAAAAACCCGTTTAGCGAATTTCTTTTCCACCACTTGGGAAGATAAAAAAAACGCCTTAACGACCACTTTT AGCGTGATTGATTTGCCTGGGTTTGGCTATGCCAAAGTTTCTAAAAGCTTGAAAAAAGAATGGGAGGGGTTTTTATGGGA ATTGTTGAGTGTGAGGACTTCAATCAAGCTTTTTATCCATTTAATAGATGCACGCCATTTGAATTTAGAAATTGATAAAA ACGCCAAAGAAAATATTCAAACCCTTTTAAGGTCCGATCAAGCTTACCTTTCTCTTTTTACGAAATTTGACAAGTTGAAT AAAAACGAGCAACACCGCCTTTTTTTAAACGCCCCTAAACCTTTTTTAATCAACACAACCCACTTTAACGCCCTTTCTTC AAAATACCCAACCCTTGAAATAGTGCGCCAAACCCTTTTAAAATACTTGCTCACTAACCCCCTATAA
Upstream 100 bases:
>100_bases GGAGTGCGAAACGGCCCGCTAAATTCGTGTTTGACATGGAGGAAATTAACGAAGAAAATCGTAAGGCGAAGCAAAGAAAG AAAAGCACCAAAGAAAAACC
Downstream 100 bases:
>100_bases GCCACAACGCCATGCTCTCTTTAAAACAAGATTCTTTTTTATTCTTATGTTTAGGGGTTTTTGGCTTTTACTTTTATAGC CTTTTAAGGGACTTGATGCC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MIIIKDAHFITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSSTPGKTRLANFFSTTWEDKKNALTTTF SVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLIDARHLNLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLN KNEQHRLFLNAPKPFLINTTHFNALSSKYPTLEIVRQTLLKYLLTNPL
Sequences:
>Translated_208_residues MIIIKDAHFITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSSTPGKTRLANFFSTTWEDKKNALTTTF SVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLIDARHLNLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLN KNEQHRLFLNAPKPFLINTTHFNALSSKYPTLEIVRQTLLKYLLTNPL >Mature_208_residues MIIIKDAHFITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSSTPGKTRLANFFSTTWEDKKNALTTTF SVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLIDARHLNLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLN KNEQHRLFLNAPKPFLINTTHFNALSSKYPTLEIVRQTLLKYLLTNPL
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Escherichia coli, GI145693205, Length=153, Percent_Identity=38.562091503268, Blast_Score=101, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_HELAH (Q17VE9)
Other databases:
- EMBL: AM260522 - RefSeq: YP_665376.1 - ProteinModelPortal: Q17VE9 - SMR: Q17VE9 - STRING: Q17VE9 - GeneID: 4176322 - GenomeReviews: AM260522_GR - KEGG: hac:Hac_1674 - NMPDR: fig|382638.8.peg.1619 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: FSTTWED - ProtClustDB: PRK00454 - BioCyc: HACI382638:HAC_1674-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23568; Mature: 23568
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIKDAHFITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSSTPGKTR CEEEECCCEECCCHHHHHCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHH LANFFSTTWEDKKNALTTTFSVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIH HHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDARHLNLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTT HHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECH HFNALSSKYPTLEIVRQTLLKYLLTNPL HHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIIIKDAHFITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSSTPGKTR CEEEECCCEECCCHHHHHCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHH LANFFSTTWEDKKNALTTTFSVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIH HHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDARHLNLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTT HHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECH HFNALSSKYPTLEIVRQTLLKYLLTNPL HHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA