| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109948042
Identifier: 109948042
GI number: 109948042
Start: 1344736
End: 1344891
Strand: Reverse
Name: 109948042
Synonym: Hac_1555
Alternate gene names: NA
Gene position: 1344891-1344736 (Counterclockwise)
Preceding gene: 109948043
Following gene: 109948041
Centisome position: 86.55
GC content: 42.95
Gene sequence:
>156_bases TTGCCCATTCAAGACACGCAAATTCTTCGCATAGCGCTAGAACAATGCAAAGAAGCGGGTGTTAATGTGTGTTGCGTGGA TTCACAAAGCATTAAGGTAGGGCTACTTAAAGACAACACGCAAATCGATGAAAGTGCAGTGGAGAAACTATCATGA
Upstream 100 bases:
>100_bases AAACACCAACAATCAATTACGGCAAGCTAAAGAAGAATGGGGAGGCTGTGACACTTTAGAGATACGCTATAGCGATAAAT CCCTTGCAAACACAAACACT
Downstream 100 bases:
>100_bases ATAAGCTAGCGTATGCGTTTGTCGTAGTGGAAGAATGTGTTATGGTGTTTAAACACACCAAAGATAAGGGGCTAATTAAT ACCACTGAAGGTTTTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MPIQDTQILRIALEQCKEAGVNVCCVDSQSIKVGLLKDNTQIDESAVEKLS
Sequences:
>Translated_51_residues MPIQDTQILRIALEQCKEAGVNVCCVDSQSIKVGLLKDNTQIDESAVEKLS >Mature_50_residues PIQDTQILRIALEQCKEAGVNVCCVDSQSIKVGLLKDNTQIDESAVEKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5575; Mature: 5444
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQDTQILRIALEQCKEAGVNVCCVDSQSIKVGLLKDNTQIDESAVEKLS CCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCHHHHHHCC >Mature Secondary Structure PIQDTQILRIALEQCKEAGVNVCCVDSQSIKVGLLKDNTQIDESAVEKLS CCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA