| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109948033
Identifier: 109948033
GI number: 109948033
Start: 1341474
End: 1341791
Strand: Reverse
Name: 109948033
Synonym: Hac_1546
Alternate gene names: NA
Gene position: 1341791-1341474 (Counterclockwise)
Preceding gene: 109948034
Following gene: 109948031
Centisome position: 86.35
GC content: 37.74
Gene sequence:
>318_bases ATGGAAAACATTCCTAGAACAGAAATCAATTGGGAATTTGTAGAGCCGCTCAATGACAATGCTCTTAAAGGGGTAAAAGA TCAATTCAAAGTGGATTTGAGCGATGCGTTTAAGGATTTTATCAAGCTGGCGAACTATGGTTTTAGTCAATGGCGTTCTT TTATGGTGGGCAATGAGACTTATGCGTTCAAACATGTTTTGAATTTCAACTTAGAGGGCGAGAGTTTATTGGTTATCCTT ATGCAGAGCTTGCTCGCATTGATTTTTAAAGATCGCTTTTTTAAAGCTACCGCTTGCTTTAAGCAAGCTCTTTTATGA
Upstream 100 bases:
>100_bases CCTAGGGGCTATTTGTGGTATTTTGACGCAAATATTTTAGGGAATTTGGCGTTAGTGAGAGAAGAGTTGCTATTAGGGGT GAAACACACGAAAGGATATT
Downstream 100 bases:
>100_bases TTAGATCATAGAAAATGCTTTTAGCATTTTTTTAACCAACCGCTTCACTTTTTGTTTGATTTTAAAAAGCAAAAATTCTA TAAGGAGTCTAGAAGAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MENIPRTEINWEFVEPLNDNALKGVKDQFKVDLSDAFKDFIKLANYGFSQWRSFMVGNETYAFKHVLNFNLEGESLLVIL MQSLLALIFKDRFFKATACFKQALL
Sequences:
>Translated_105_residues MENIPRTEINWEFVEPLNDNALKGVKDQFKVDLSDAFKDFIKLANYGFSQWRSFMVGNETYAFKHVLNFNLEGESLLVIL MQSLLALIFKDRFFKATACFKQALL >Mature_105_residues MENIPRTEINWEFVEPLNDNALKGVKDQFKVDLSDAFKDFIKLANYGFSQWRSFMVGNETYAFKHVLNFNLEGESLLVIL MQSLLALIFKDRFFKATACFKQALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12233; Mature: 12233
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIPRTEINWEFVEPLNDNALKGVKDQFKVDLSDAFKDFIKLANYGFSQWRSFMVGNET CCCCCCCCCCCCCCCCCCCCHHHCCHHHHEECHHHHHHHHHHHHCCCHHHHHHHHCCCCH YAFKHVLNFNLEGESLLVILMQSLLALIFKDRFFKATACFKQALL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENIPRTEINWEFVEPLNDNALKGVKDQFKVDLSDAFKDFIKLANYGFSQWRSFMVGNET CCCCCCCCCCCCCCCCCCCCHHHCCHHHHEECHHHHHHHHHHHHCCCHHHHHHHHCCCCH YAFKHVLNFNLEGESLLVILMQSLLALIFKDRFFKATACFKQALL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA