| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is Hac prophage I orf4
Identifier: 109947847
GI number: 109947847
Start: 1159373
End: 1159579
Strand: Reverse
Name: Hac prophage I orf4
Synonym: Hac_1337
Alternate gene names: NA
Gene position: 1159579-1159373 (Counterclockwise)
Preceding gene: 109947848
Following gene: 109947846
Centisome position: 74.62
GC content: 41.06
Gene sequence:
>207_bases ATGCCTTTTGTCAATATTAAAATCACCAAAGAAAATGGTCCCACTAAAGAGCAAAAAGAAGAATTGATTGCTGGGGTTAC AGAGGTGTTAGTCAAAGTCCTCCACAAAAACAAGGCTTCTACTGTGGTAATCATCGAAGAGATCGATACAGACAACTATG GCTTAGGGGGGCAAAGCATTACACAGGTGCGCAAGGCTAACTCATAA
Upstream 100 bases:
>100_bases ATCCAACACTAGGTACTAGGCTGTGTCAACAAGACAAATGTTATACTTTTCAATAAAATGTTATAATGTTTTACTAAAAT TTAGTCAATGAGGAGAATCC
Downstream 100 bases:
>100_bases GCTCATGGCTTGCTCTCTAGTAGGGCATCCTCTAGCTCTAAACCACTCCTAATAAGGATTGGGTAACAATCCGTTTCGTT CAAATGGTTCTACGCTTGGG
Product: tautomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPFVNIKITKENGPTKEQKEELIAGVTEVLVKVLHKNKASTVVIIEEIDTDNYGLGGQSITQVRKANS
Sequences:
>Translated_68_residues MPFVNIKITKENGPTKEQKEELIAGVTEVLVKVLHKNKASTVVIIEEIDTDNYGLGGQSITQVRKANS >Mature_67_residues PFVNIKITKENGPTKEQKEELIAGVTEVLVKVLHKNKASTVVIIEEIDTDNYGLGGQSITQVRKANS
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR018191 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 7466; Mature: 7334
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVNIKITKENGPTKEQKEELIAGVTEVLVKVLHKNKASTVVIIEEIDTDNYGLGGQSI CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH TQVRKANS HHHHCCCC >Mature Secondary Structure PFVNIKITKENGPTKEQKEELIAGVTEVLVKVLHKNKASTVVIIEEIDTDNYGLGGQSI CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH TQVRKANS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]