Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947797

Identifier: 109947797

GI number: 109947797

Start: 1098674

End: 1099039

Strand: Reverse

Name: 109947797

Synonym: Hac_1276

Alternate gene names: NA

Gene position: 1099039-1098674 (Counterclockwise)

Preceding gene: 109947798

Following gene: 109947795

Centisome position: 70.73

GC content: 32.51

Gene sequence:

>366_bases
ATGCCTAACGCTACCACAGAAAAAGACTACACTAAATACAGCGAAAAACAGCTTTTTAATTTAATCAACAAATTAGAACA
AAAAATCAAAAAAATGCAAGATGACAGGATCTCTTTCAAAGAAAAAATGGCTAAAGAATTAGAAAAGAGAGACAAAAACT
TTAAGGATAAATTGGACGCAGCCAATGAACTTTTGCAAAAAATCAGCCAAGTTTTTGGTGATAAAAAAGATTGTTGTTTG
GGGCATGAAATCCCAAACCTTGAAACGCGACAAGCCATAAGAGAGATGTTAAATGGAGTTAATCTCACTCAAATTGATAG
TTTAGATGGACTTACAAACGAGTTAAAAAAGAGAAATCAATGCTAG

Upstream 100 bases:

>100_bases
TTCACTTATAAAGTTTTTATTTTAACCCATTTCCTTAATCCATCCAATTCATGGTGCTTGTGTTATAATGAATTTATCTT
AATCTAATAAAGGAATAAAC

Downstream 100 bases:

>100_bases
ATATTGAGTATCATAGCTTATTTAGAAAAGACTATAAAAAATACCTCAAAAATGGCTTTGATAGTAAGCTACTTGATGGA
ATAGTTTTAGAATTAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPNATTEKDYTKYSEKQLFNLINKLEQKIKKMQDDRISFKEKMAKELEKRDKNFKDKLDAANELLQKISQVFGDKKDCCL
GHEIPNLETRQAIREMLNGVNLTQIDSLDGLTNELKKRNQC

Sequences:

>Translated_121_residues
MPNATTEKDYTKYSEKQLFNLINKLEQKIKKMQDDRISFKEKMAKELEKRDKNFKDKLDAANELLQKISQVFGDKKDCCL
GHEIPNLETRQAIREMLNGVNLTQIDSLDGLTNELKKRNQC
>Mature_120_residues
PNATTEKDYTKYSEKQLFNLINKLEQKIKKMQDDRISFKEKMAKELEKRDKNFKDKLDAANELLQKISQVFGDKKDCCLG
HEIPNLETRQAIREMLNGVNLTQIDSLDGLTNELKKRNQC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14165; Mature: 14034

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNATTEKDYTKYSEKQLFNLINKLEQKIKKMQDDRISFKEKMAKELEKRDKNFKDKLDA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ANELLQKISQVFGDKKDCCLGHEIPNLETRQAIREMLNGVNLTQIDSLDGLTNELKKRNQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
C
C
>Mature Secondary Structure 
PNATTEKDYTKYSEKQLFNLINKLEQKIKKMQDDRISFKEKMAKELEKRDKNFKDKLDA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ANELLQKISQVFGDKKDCCLGHEIPNLETRQAIREMLNGVNLTQIDSLDGLTNELKKRNQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA