| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is 109947762
Identifier: 109947762
GI number: 109947762
Start: 1070470
End: 1071345
Strand: Reverse
Name: 109947762
Synonym: Hac_1238
Alternate gene names: NA
Gene position: 1071345-1070470 (Counterclockwise)
Preceding gene: 109947763
Following gene: 109947761
Centisome position: 68.94
GC content: 40.53
Gene sequence:
>876_bases ATGAAACGAAGAGATTTTATTAAAACAACTGCTTTAGGTACTATGGGCGTTGTTTTAGGAACACAGATTTTACAGGCAAA GGGAAGCGAAAAAAACGCTACAAAATATAAGATAGAGGCTGAGTATAGCATTGATTTTGATTCTGCAGAACGCACTTCAT TGTTCATCCCCATGCCGAGCGTTGTAGCGAGCAATGTGCATTTACAAGGCAATCATGTTAATTATAAGAGCATGTTGAGT TTTGGCGTGCCTTATTTGCAAGTGGATTTTTTAAAAAGCGCTCAAAAAAAGCAAGTCCATTTGTCTTATGAAATCGCTAG CTATCAATTAAAGGATCGTTTGTTTGAAACGAGCGATTTTGTAGCGATCGGGCGTTATGAGAGGGATGATGCGAGTGTGG TGAGCATTGCAAACCAGCTTAAGGGAATGACCCCCAAAGAAAGCGTGCACAATTTTTATGCGTTCATTAAGCATGAGATG CCTAAAAGGCAAAAGGCTTTAGAGGGTAAAGAAAATTTACCGAAACGAGAGAGTTTGCCTTGGTTTGCAACCATCTCTAA AGAAAGCATGTTTGTGTCTCTATGCCATGCATGTGGGATTAAGAGTGCTGAAGTGCAAGGCTTGAAACTGGGTCAAAACA GCGTGGTGAAAAACGCCCCCATGGTGGAAGTGTATTTGAACGATTCTTTGTTGGCGTTTGATTTTCAAGGCGATCATGAG GAAGTCTTTATCCCATTGAACCGCCATAAAGACATGCAATTAGATTCTGCCTTATTACCGACTTTTGGCGAGGCTTTCGC TCTTGTGGATGGTAGGGATTTAGGCAATTATGAGAGCAAACTTTTTGAAAAAAGAATGTCTTATACGGCTGTTTAA
Upstream 100 bases:
>100_bases TTAGGTTTTTGAGATAGCCACCAATCCTTAAAGGCTTGGTGGTTTGTCTTGCTTTTTCATTCATTCAATAAATTTAAAAA TTACAATAAAGAGTTATGTG
Downstream 100 bases:
>100_bases GATTTTTGAGTTAATAGTGAGCTTTCCTTTTTAGGAGGGTTTGCAAAAAGATTTAAAGGGTTGTTTTGTGAGAGAAATTT TTGAGCAACTTTTCAAGGAA
Product: katA associated protein
Products: NA
Alternate protein names: KatA Associated Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKRRDFIKTTALGTMGVVLGTQILQAKGSEKNATKYKIEAEYSIDFDSAERTSLFIPMPSVVASNVHLQGNHVNYKSMLS FGVPYLQVDFLKSAQKKQVHLSYEIASYQLKDRLFETSDFVAIGRYERDDASVVSIANQLKGMTPKESVHNFYAFIKHEM PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPMVEVYLNDSLLAFDFQGDHE EVFIPLNRHKDMQLDSALLPTFGEAFALVDGRDLGNYESKLFEKRMSYTAV
Sequences:
>Translated_291_residues MKRRDFIKTTALGTMGVVLGTQILQAKGSEKNATKYKIEAEYSIDFDSAERTSLFIPMPSVVASNVHLQGNHVNYKSMLS FGVPYLQVDFLKSAQKKQVHLSYEIASYQLKDRLFETSDFVAIGRYERDDASVVSIANQLKGMTPKESVHNFYAFIKHEM PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPMVEVYLNDSLLAFDFQGDHE EVFIPLNRHKDMQLDSALLPTFGEAFALVDGRDLGNYESKLFEKRMSYTAV >Mature_291_residues MKRRDFIKTTALGTMGVVLGTQILQAKGSEKNATKYKIEAEYSIDFDSAERTSLFIPMPSVVASNVHLQGNHVNYKSMLS FGVPYLQVDFLKSAQKKQVHLSYEIASYQLKDRLFETSDFVAIGRYERDDASVVSIANQLKGMTPKESVHNFYAFIKHEM PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPMVEVYLNDSLLAFDFQGDHE EVFIPLNRHKDMQLDSALLPTFGEAFALVDGRDLGNYESKLFEKRMSYTAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32827; Mature: 32827
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDFIKTTALGTMGVVLGTQILQAKGSEKNATKYKIEAEYSIDFDSAERTSLFIPMPS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEECHH VVASNVHLQGNHVNYKSMLSFGVPYLQVDFLKSAQKKQVHLSYEIASYQLKDRLFETSDF HHHCCEEEECCCCCHHHHHHHCCCCEEHHHHHCCCCCEEEEEEEHHHHHHHHHHHCCCCE VAIGRYERDDASVVSIANQLKGMTPKESVHNFYAFIKHEMPKRQKALEGKENLPKRESLP EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCC WFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPMVEVYLNDSLLAFDFQGDHE EEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCCEEEEEECCCEEEEEECCCCC EVFIPLNRHKDMQLDSALLPTFGEAFALVDGRDLGNYESKLFEKRMSYTAV EEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKRRDFIKTTALGTMGVVLGTQILQAKGSEKNATKYKIEAEYSIDFDSAERTSLFIPMPS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEECHH VVASNVHLQGNHVNYKSMLSFGVPYLQVDFLKSAQKKQVHLSYEIASYQLKDRLFETSDF HHHCCEEEECCCCCHHHHHHHCCCCEEHHHHHCCCCCEEEEEEEHHHHHHHHHHHCCCCE VAIGRYERDDASVVSIANQLKGMTPKESVHNFYAFIKHEMPKRQKALEGKENLPKRESLP EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCC WFATISKESMFVSLCHACGIKSAEVQGLKLGQNSVVKNAPMVEVYLNDSLLAFDFQGDHE EEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCCEEEEEECCCEEEEEECCCCC EVFIPLNRHKDMQLDSALLPTFGEAFALVDGRDLGNYESKLFEKRMSYTAV EEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA