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The map label for this gene is cdh [H]

Identifier: 109947759

GI number: 109947759

Start: 1068820

End: 1069560

Strand: Reverse

Name: cdh [H]

Synonym: Hac_1235

Alternate gene names: 109947759

Gene position: 1069560-1068820 (Counterclockwise)

Preceding gene: 109947761

Following gene: 109947758

Centisome position: 68.83

GC content: 41.03

Gene sequence:

>741_bases
ATGAAAAAAATGGGCTTTCTTTTTTGGGCGATGACAGCTATCGTTGTTATGACTAATAGCTTAAGCGCTAAAGATCCGAA
CATATTGCGTAAGATTGTTTTTGAAAAATGTTTGCCTAATTATGAGAAAAACCAAAATCCTTCGCCATGCATAGAAGTCA
AACCTAATACCGGCTATGTGGTTTTAAAAGATATTAACGGTCCGTTGCAATATTTGTTGATGCCAATAAATCGTATTGAC
GGCATTGAAAGCCCTTTGTTGCTTGATCCTTCTACACCTAATTTTTTTTGGTTATCTTGGCAGGCACGCGAATTTATGAG
TCAAAAATACGGCCAACCGATTCCTGATCGCGCGATCTCTTTGACGATAAACTCTAGCAAAGGACGCTCGCAAAACCATT
TGCATATCCACATTTCTTGCATCCGCTCTGATGTGCGCAAACACTTGGATAATAATCTAAAAAACATCAATAGCCGTTGG
TCGCCATTACTGGGTGGTTTGCAAGGGCATAAATACTTGGCGCGTCGGGTAACAGAGAGCGAGTTAGCGCAAAAAAGCCC
ATTTGTCATGCTTGCTAAAGAAGTGCTAGGAGCGCATAAACGCATGGGAGATTATGGGTTAGCGGTGGTGTTGCAAAATG
ATAACTCATTTGTCTTGTTGGCGACGCAATTTGACCCACTGACTTCCAATCGCGCTTCAGCCGAAGAAATTCAAGATCAT
GAATGCGAAATTTTAAATTGA

Upstream 100 bases:

>100_bases
CATTAAAATAATCACAACAATTAAAACTTTTAAGCAACTATTGTAGAAAAATAACAGGAGAGTTTGCAAAAACTCTCATC
AAAAAACAAGGAGTAAAAAG

Downstream 100 bases:

>100_bases
AGCGAGTCAAATTTTAGGGCTTGAGCGATAGCTTTTAAAAGCGTTGTTAGGGGGTAGTGTTACAAAACCCCCTATCCCCT
TATGAGTTTGACTAACCTTT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKKMGFLFWAMTAIVVMTNSLSAKDPNILRKIVFEKCLPNYEKNQNPSPCIEVKPNTGYVVLKDINGPLQYLLMPINRID
GIESPLLLDPSTPNFFWLSWQAREFMSQKYGQPIPDRAISLTINSSKGRSQNHLHIHISCIRSDVRKHLDNNLKNINSRW
SPLLGGLQGHKYLARRVTESELAQKSPFVMLAKEVLGAHKRMGDYGLAVVLQNDNSFVLLATQFDPLTSNRASAEEIQDH
ECEILN

Sequences:

>Translated_246_residues
MKKMGFLFWAMTAIVVMTNSLSAKDPNILRKIVFEKCLPNYEKNQNPSPCIEVKPNTGYVVLKDINGPLQYLLMPINRID
GIESPLLLDPSTPNFFWLSWQAREFMSQKYGQPIPDRAISLTINSSKGRSQNHLHIHISCIRSDVRKHLDNNLKNINSRW
SPLLGGLQGHKYLARRVTESELAQKSPFVMLAKEVLGAHKRMGDYGLAVVLQNDNSFVLLATQFDPLTSNRASAEEIQDH
ECEILN
>Mature_246_residues
MKKMGFLFWAMTAIVVMTNSLSAKDPNILRKIVFEKCLPNYEKNQNPSPCIEVKPNTGYVVLKDINGPLQYLLMPINRID
GIESPLLLDPSTPNFFWLSWQAREFMSQKYGQPIPDRAISLTINSSKGRSQNHLHIHISCIRSDVRKHLDNNLKNINSRW
SPLLGGLQGHKYLARRVTESELAQKSPFVMLAKEVLGAHKRMGDYGLAVVLQNDNSFVLLATQFDPLTSNRASAEEIQDH
ECEILN

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=250, Percent_Identity=71.2, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763
- InterPro:   IPR015993 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 27917; Mature: 27917

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMGFLFWAMTAIVVMTNSLSAKDPNILRKIVFEKCLPNYEKNQNPSPCIEVKPNTGYV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEE
VLKDINGPLQYLLMPINRIDGIESPLLLDPSTPNFFWLSWQAREFMSQKYGQPIPDRAIS
EEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEE
LTINSSKGRSQNHLHIHISCIRSDVRKHLDNNLKNINSRWSPLLGGLQGHKYLARRVTES
EEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHH
ELAQKSPFVMLAKEVLGAHKRMGDYGLAVVLQNDNSFVLLATQFDPLTSNRASAEEIQDH
HHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCC
ECEILN
CCEECC
>Mature Secondary Structure
MKKMGFLFWAMTAIVVMTNSLSAKDPNILRKIVFEKCLPNYEKNQNPSPCIEVKPNTGYV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEE
VLKDINGPLQYLLMPINRIDGIESPLLLDPSTPNFFWLSWQAREFMSQKYGQPIPDRAIS
EEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEE
LTINSSKGRSQNHLHIHISCIRSDVRKHLDNNLKNINSRWSPLLGGLQGHKYLARRVTES
EEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHH
ELAQKSPFVMLAKEVLGAHKRMGDYGLAVVLQNDNSFVLLATQFDPLTSNRASAEEIQDH
HHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCC
ECEILN
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]