| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947471
Identifier: 109947471
GI number: 109947471
Start: 808024
End: 808839
Strand: Reverse
Name: 109947471
Synonym: Hac_0923
Alternate gene names: NA
Gene position: 808839-808024 (Counterclockwise)
Preceding gene: 109947472
Following gene: 109947470
Centisome position: 52.05
GC content: 41.91
Gene sequence:
>816_bases ATGAAAACCATCATAAAATTGGCGTTAATGCCATTAAGAGCGAGTTTAAAAGCATTCCAAAAGCTTTATATTGTTTGCGT GGTTGTTTGGGGGTTGGGTTGTGGTTTTTTAAACGCTAACAGCATCCAACTAGAAGAAACGCTCAGACGCCCCACTAAAA ACCTCTCATGGCATTATTTTAAAAAGAAGTTTGAAAAGAGCAACACGATCCCTTATACCCCCAATAGCCGTTGGAAATAT TTAGGCACGAGCATTGGGATTTTGGGTGCGTCGTTGGTGCTAGGGATTGTAGGGTTGTATTTCATGCCAGAGAGCGTGAC GAACTGGGATAGAGAAAAGTTTGGCGTTAAAAGCTGGTTTGAAAATGTCCGCATGGGGCCAAAGCTCGATCATGATAGCT TTATTTTTAATGAAGTTTTGCACCCTTATTTTGGGGCTATGTATTATATGCAACCACGCATGGCTGGGTTTAGTTGGATG GCTTCGGCGTTTTTTTCTTTTATCACTTCTACATTTTTTTGGGAATATGGCTTGGAAGCGTTTGTGGAAGTGCCTAGCTG GCAGGATTTGGTGATCACGCCTTTACTAGGATCTATACTAGGAGAAGGGTTTTACCAGCTCACGCGCTATATCCAACGCA ACGAGGGCAAGCTTTTTGGATCGTTATTTTTGGGGCGTTTGGTCATCGCGCTGATGGATCCTATTGGTTTTATTATTAGG GATTTAGGGCTTGGGGAAGCTTTAGGGATTTATAACACAAAGGAATTCCACTCTAGCTTAAGCCCCAATGGTTTGAACTT GACTTACAAATTTTAA
Upstream 100 bases:
>100_bases AACGATTAGTCTTTAAGGCTTGTTGCATTTATTGAGTATACGGTGGTGTTTTTAAGATACAATACAATCTTTTAAGTTAA GTAGTAAAGTTTATAGGCTA
Downstream 100 bases:
>100_bases AGGAGCATTTATGTCTAGCGATTTCAAAAACATTTTCATCGGTGCGGATAACAATAAACGCACTAGCCCTAACTTGAGCG ATAACGAAAAAAACCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKTIIKLALMPLRASLKAFQKLYIVCVVVWGLGCGFLNANSIQLEETLRRPTKNLSWHYFKKKFEKSNTIPYTPNSRWKY LGTSIGILGASLVLGIVGLYFMPESVTNWDREKFGVKSWFENVRMGPKLDHDSFIFNEVLHPYFGAMYYMQPRMAGFSWM ASAFFSFITSTFFWEYGLEAFVEVPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIR DLGLGEALGIYNTKEFHSSLSPNGLNLTYKF
Sequences:
>Translated_271_residues MKTIIKLALMPLRASLKAFQKLYIVCVVVWGLGCGFLNANSIQLEETLRRPTKNLSWHYFKKKFEKSNTIPYTPNSRWKY LGTSIGILGASLVLGIVGLYFMPESVTNWDREKFGVKSWFENVRMGPKLDHDSFIFNEVLHPYFGAMYYMQPRMAGFSWM ASAFFSFITSTFFWEYGLEAFVEVPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIR DLGLGEALGIYNTKEFHSSLSPNGLNLTYKF >Mature_271_residues MKTIIKLALMPLRASLKAFQKLYIVCVVVWGLGCGFLNANSIQLEETLRRPTKNLSWHYFKKKFEKSNTIPYTPNSRWKY LGTSIGILGASLVLGIVGLYFMPESVTNWDREKFGVKSWFENVRMGPKLDHDSFIFNEVLHPYFGAMYYMQPRMAGFSWM ASAFFSFITSTFFWEYGLEAFVEVPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIR DLGLGEALGIYNTKEFHSSLSPNGLNLTYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31071; Mature: 31071
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIIKLALMPLRASLKAFQKLYIVCVVVWGLGCGFLNANSIQLEETLRRPTKNLSWHYF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHCCCCHHHH KKKFEKSNTIPYTPNSRWKYLGTSIGILGASLVLGIVGLYFMPESVTNWDREKFGVKSWF HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH ENVRMGPKLDHDSFIFNEVLHPYFGAMYYMQPRMAGFSWMASAFFSFITSTFFWEYGLEA HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVEVPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIR HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DLGLGEALGIYNTKEFHSSLSPNGLNLTYKF HHCCCCHHCCCCCHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MKTIIKLALMPLRASLKAFQKLYIVCVVVWGLGCGFLNANSIQLEETLRRPTKNLSWHYF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHCCCCHHHH KKKFEKSNTIPYTPNSRWKYLGTSIGILGASLVLGIVGLYFMPESVTNWDREKFGVKSWF HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH ENVRMGPKLDHDSFIFNEVLHPYFGAMYYMQPRMAGFSWMASAFFSFITSTFFWEYGLEA HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVEVPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIR HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DLGLGEALGIYNTKEFHSSLSPNGLNLTYKF HHCCCCHHCCCCCHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA