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The map label for this gene is rsmI [H]

Identifier: 109947426

GI number: 109947426

Start: 764054

End: 764917

Strand: Reverse

Name: rsmI [H]

Synonym: Hac_0873

Alternate gene names: 109947426

Gene position: 764917-764054 (Counterclockwise)

Preceding gene: 109947427

Following gene: 109947425

Centisome position: 49.22

GC content: 40.05

Gene sequence:

>864_bases
GTGCTGTATTTTTTGCCCACTCCTATAGGTAATCTCGCTGACATTACGCTACGTACCTTAGAAGTTCTAGAGCGTTGCGA
GATTTTTTTGTGTGAGGATACAAGGGTGAGCAAGAGGCTGTTGCACTTGCTCGCACAAAACCCTATTATTGGTCATTCTT
TCCCTAATATCGCTACTAAAAAAAGGGAATTTATCGCTTTCCATTCGCACAATGACCAAGAGTTTTTAAGTCAAATAGAG
CTTTCTTTTTTTGACAAAGAAATCGCTGTGATGAGTGATGCGGGCATGCCAAGCTTGAGTGATCCATGCATGAGTTTAGT
CGCTTACGCTTTAAAGCATAATATCCAATACGATGTGTTGCCTGGGGCTAGTGCACTCACTACGGCGTTTTGTGCGAGCG
GGTTTTTAGAAGGGTGCTTTTTTTACGCCGGTTTTTTGCCTCATAAGAGTAAGGAAAGGCGCTTAAGAATTGCTAAGATT
TTAAACGCTTTAGCGTATTTGGAGGAAAAAACCCCAGTGGTTTTTTATGAAAGTCCGCACCGGTTGTTAGAGACTTTAAA
GGATTTAAACGATTTGGCTAGTGGCATGCATTTGTTTGCGGCTAAGGAGCTTACCAAACTCCACCAGCACTATTATTTAG
GAGAAATTTCTCAAATAATGACGCAGTTACAAAAGAATAATATCCAAGGGGAGTGGGTTTTAGTGCTTTTGAATGAGAAA
AAAATAGAGCCTTGTATGGGGCTATCGGCGTTATTAGAGTTGGATTTGCCTCCTAAAATTAAGACTAAAATTGAAGCCAC
TATGACACAACAAAACGCTAAAGAGCTTTATAGCCAGCGTTTGTTAGAAGAAAAAAATCAATAA

Upstream 100 bases:

>100_bases
CTATACCGGTAGCGATAAAATCGCTGACACTGCAGGGAGAGTAGAGAAATTTAAGCAACGCTACAATTTGAAGTAACTCT
TTTAAAAAGCGTGGTTTTTT

Downstream 100 bases:

>100_bases
AAGGGGTTTAGTATGCAAGCAGTGATTTATGGCAAACAGGTGGTTATGCATATTCTAAACTCTCATCAAGAAAAGTTGCA
AGAAATCTATCTTTCTAAAG

Product: methylase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MLYFLPTPIGNLADITLRTLEVLERCEIFLCEDTRVSKRLLHLLAQNPIIGHSFPNIATKKREFIAFHSHNDQEFLSQIE
LSFFDKEIAVMSDAGMPSLSDPCMSLVAYALKHNIQYDVLPGASALTTAFCASGFLEGCFFYAGFLPHKSKERRLRIAKI
LNALAYLEEKTPVVFYESPHRLLETLKDLNDLASGMHLFAAKELTKLHQHYYLGEISQIMTQLQKNNIQGEWVLVLLNEK
KIEPCMGLSALLELDLPPKIKTKIEATMTQQNAKELYSQRLLEEKNQ

Sequences:

>Translated_287_residues
MLYFLPTPIGNLADITLRTLEVLERCEIFLCEDTRVSKRLLHLLAQNPIIGHSFPNIATKKREFIAFHSHNDQEFLSQIE
LSFFDKEIAVMSDAGMPSLSDPCMSLVAYALKHNIQYDVLPGASALTTAFCASGFLEGCFFYAGFLPHKSKERRLRIAKI
LNALAYLEEKTPVVFYESPHRLLETLKDLNDLASGMHLFAAKELTKLHQHYYLGEISQIMTQLQKNNIQGEWVLVLLNEK
KIEPCMGLSALLELDLPPKIKTKIEATMTQQNAKELYSQRLLEEKNQ
>Mature_287_residues
MLYFLPTPIGNLADITLRTLEVLERCEIFLCEDTRVSKRLLHLLAQNPIIGHSFPNIATKKREFIAFHSHNDQEFLSQIE
LSFFDKEIAVMSDAGMPSLSDPCMSLVAYALKHNIQYDVLPGASALTTAFCASGFLEGCFFYAGFLPHKSKERRLRIAKI
LNALAYLEEKTPVVFYESPHRLLETLKDLNDLASGMHLFAAKELTKLHQHYYLGEISQIMTQLQKNNIQGEWVLVLLNEK
KIEPCMGLSALLELDLPPKIKTKIEATMTQQNAKELYSQRLLEEKNQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=269, Percent_Identity=35.6877323420074, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32701; Mature: 32701

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFLPTPIGNLADITLRTLEVLERCEIFLCEDTRVSKRLLHLLAQNPIIGHSFPNIATK
CEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHC
KREFIAFHSHNDQEFLSQIELSFFDKEIAVMSDAGMPSLSDPCMSLVAYALKHNIQYDVL
HHHEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCEEEC
PGASALTTAFCASGFLEGCFFYAGFLPHKSKERRLRIAKILNALAYLEEKTPVVFYESPH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
RLLETLKDLNDLASGMHLFAAKELTKLHQHYYLGEISQIMTQLQKNNIQGEWVLVLLNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
KIEPCMGLSALLELDLPPKIKTKIEATMTQQNAKELYSQRLLEEKNQ
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLYFLPTPIGNLADITLRTLEVLERCEIFLCEDTRVSKRLLHLLAQNPIIGHSFPNIATK
CEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHC
KREFIAFHSHNDQEFLSQIELSFFDKEIAVMSDAGMPSLSDPCMSLVAYALKHNIQYDVL
HHHEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCEEEC
PGASALTTAFCASGFLEGCFFYAGFLPHKSKERRLRIAKILNALAYLEEKTPVVFYESPH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
RLLETLKDLNDLASGMHLFAAKELTKLHQHYYLGEISQIMTQLQKNNIQGEWVLVLLNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
KIEPCMGLSALLELDLPPKIKTKIEATMTQQNAKELYSQRLLEEKNQ
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]