| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947370
Identifier: 109947370
GI number: 109947370
Start: 706325
End: 706585
Strand: Reverse
Name: 109947370
Synonym: Hac_0815
Alternate gene names: NA
Gene position: 706585-706325 (Counterclockwise)
Preceding gene: 109947371
Following gene: 109947369
Centisome position: 45.47
GC content: 34.87
Gene sequence:
>261_bases GTGCCATCTAATTTAGAAAAACCCACCATCATTTACCCTTGCATTTGGGATTATAGGGTGATTATGACCACCAAAGATTC AAGCTTATTGAAAGAGCTTTTAGAAGCCTACCAACGCCCCTTTAAATTAGAATTGAAAAACACTTCTAAAAATGCTAGAT TTTATAGCTTTAATGCATCCATTGAAGTGGCAAACGAGTTAGAACGCAACGAGATCTTTCAAAAAATTTCACAATTAAAG GTTGTGGTTCATGCACTTTAA
Upstream 100 bases:
>100_bases GCACCTTTTAAAGTCTTTGCTTCAGAAATCAAATTTGGCTTTGTGGATCGCCATAAATACAGCCCCATTGCCATTCCTGA ATTGTTTAGGGAGTTGCTTA
Downstream 100 bases:
>100_bases TCTTGGCTGTTTTTATAAAAATTTAAATCTTTTTAATTATTTTAAAAAAAAGGATTTTAAAGCTTTTAAAACTCATTCTC TTAAGGGGATAGGGGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPSNLEKPTIIYPCIWDYRVIMTTKDSSLLKELLEAYQRPFKLELKNTSKNARFYSFNASIEVANELERNEIFQKISQLK VVVHAL
Sequences:
>Translated_86_residues MPSNLEKPTIIYPCIWDYRVIMTTKDSSLLKELLEAYQRPFKLELKNTSKNARFYSFNASIEVANELERNEIFQKISQLK VVVHAL >Mature_85_residues PSNLEKPTIIYPCIWDYRVIMTTKDSSLLKELLEAYQRPFKLELKNTSKNARFYSFNASIEVANELERNEIFQKISQLKV VVHAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.jejuni CJ0253 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007454 [H]
Pfam domain/function: PF04359 DUF493 [H]
EC number: NA
Molecular weight: Translated: 10108; Mature: 9977
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNLEKPTIIYPCIWDYRVIMTTKDSSLLKELLEAYQRPFKLELKNTSKNARFYSFNAS CCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCC IEVANELERNEIFQKISQLKVVVHAL EEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSNLEKPTIIYPCIWDYRVIMTTKDSSLLKELLEAYQRPFKLELKNTSKNARFYSFNAS CCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCC IEVANELERNEIFQKISQLKVVVHAL EEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]