| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947357
Identifier: 109947357
GI number: 109947357
Start: 694818
End: 695333
Strand: Reverse
Name: 109947357
Synonym: Hac_0797
Alternate gene names: NA
Gene position: 695333-694818 (Counterclockwise)
Preceding gene: 109947364
Following gene: 109947356
Centisome position: 44.75
GC content: 37.02
Gene sequence:
>516_bases ATGGGCTTGAAAAATCTCTCAATACTTCTAGTATTTTTATTTTTTTGTTTGGGGTGTGTGAGCAATTTTAATGAAAACAC TTACACGCCGGATCTCATTTTAGAAAAAAAGATCCAAGCCAGTAGGAAAGGCGAAATCACTCAAAATAATGTCCCTATCA TCACGGCTATCGCCACGCATTTAAACGATGTGGATAGCGGTGCTCATTATAACCATGAGTATTTTTTAGTGGAGATTTTT ACACAAAATAACGACTGGATAGATGATGGCTATATCTCTTATGAGCTTTTTGGCACAAAACCTACAGGATCAGAACCTTT ATGGGTGCGAGAAATCACAAGAGATGAATTTGATGGCATTTTAGAAACCACGAACAAGTGGAGCCGAGCCTTTTTACTCG CTTTTGACAAATTAGATTATTTAGCGGTGCAAGAAGCTAAATTGCAGCTTGACGCTTATAGTTTAGGCACGATTATTTTT AATTTCGCTTATCAAGTCCCCTTACCTCAATTTTAA
Upstream 100 bases:
>100_bases TAGTTTGGAGCAAGTGTCGGCATTGTTTTGGCATAAAACCCCCTTTTGGTTATAATATGGCTTTTATTTTAGCTAAAAAT GGCATGGGTTTTAGCAAGGA
Downstream 100 bases:
>100_bases TGCGCCTAGATTACGCCTTATTTGATCAGCATTTAGTGAGTAGCAGAGAAAAAGCGAAAGTGCTGATTTTAAAAAACCAG GTTTTAGTTAATAAAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MGLKNLSILLVFLFFCLGCVSNFNENTYTPDLILEKKIQASRKGEITQNNVPIITAIATHLNDVDSGAHYNHEYFLVEIF TQNNDWIDDGYISYELFGTKPTGSEPLWVREITRDEFDGILETTNKWSRAFLLAFDKLDYLAVQEAKLQLDAYSLGTIIF NFAYQVPLPQF
Sequences:
>Translated_171_residues MGLKNLSILLVFLFFCLGCVSNFNENTYTPDLILEKKIQASRKGEITQNNVPIITAIATHLNDVDSGAHYNHEYFLVEIF TQNNDWIDDGYISYELFGTKPTGSEPLWVREITRDEFDGILETTNKWSRAFLLAFDKLDYLAVQEAKLQLDAYSLGTIIF NFAYQVPLPQF >Mature_170_residues GLKNLSILLVFLFFCLGCVSNFNENTYTPDLILEKKIQASRKGEITQNNVPIITAIATHLNDVDSGAHYNHEYFLVEIFT QNNDWIDDGYISYELFGTKPTGSEPLWVREITRDEFDGILETTNKWSRAFLLAFDKLDYLAVQEAKLQLDAYSLGTIIFN FAYQVPLPQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19617; Mature: 19486
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKNLSILLVFLFFCLGCVSNFNENTYTPDLILEKKIQASRKGEITQNNVPIITAIATH CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEHHHHH LNDVDSGAHYNHEYFLVEIFTQNNDWIDDGYISYELFGTKPTGSEPLWVREITRDEFDGI HCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHH LETTNKWSRAFLLAFDKLDYLAVQEAKLQLDAYSLGTIIFNFAYQVPLPQF HHCCCCHHHEEEEHHCCCHHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GLKNLSILLVFLFFCLGCVSNFNENTYTPDLILEKKIQASRKGEITQNNVPIITAIATH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEHHHHH LNDVDSGAHYNHEYFLVEIFTQNNDWIDDGYISYELFGTKPTGSEPLWVREITRDEFDGI HCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHH LETTNKWSRAFLLAFDKLDYLAVQEAKLQLDAYSLGTIIFNFAYQVPLPQF HHCCCCHHHEEEEHHCCCHHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA