Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947338

Identifier: 109947338

GI number: 109947338

Start: 672980

End: 673195

Strand: Direct

Name: 109947338

Synonym: Hac_0776

Alternate gene names: NA

Gene position: 672980-673195 (Clockwise)

Preceding gene: 109947337

Following gene: 109947345

Centisome position: 43.31

GC content: 39.35

Gene sequence:

>216_bases
GTGCCAGCGGTAATTAAAGTCCCAATCCTTAAAACAAGCCCATCGCATGAAATATGGCTTAACGCTACAATACAAAACCC
TATTTTAGGCGAATGCACTTTAAAAGACGACGCAGGGTATCAATGTGTGATAAGACAAGTAACTTTAGACTCCAATGTTA
GAGATTTAGGAACAAGCACCGAATTTACGATTAAGGGCGACTTTTATCCCAACTAA

Upstream 100 bases:

>100_bases
TAGCTGATTTAGGTGAGGAACAGATGAGCGTGGAATTAGAGAGCGATAGTGTGAATAGGTTACTAGCGGTCACTCAAACC
ATAATAAGCTCAATATTTTT

Downstream 100 bases:

>100_bases
GATTTGATTAAAATTCCAGTCAAAAAAACAAAATCTAAAATCGCTTTAGCGTTTCAAATAATCCTTAAGTTCAAGATAAA
TAAGCGGATTTTCTCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPAVIKVPILKTSPSHEIWLNATIQNPILGECTLKDDAGYQCVIRQVTLDSNVRDLGTSTEFTIKGDFYPN

Sequences:

>Translated_71_residues
MPAVIKVPILKTSPSHEIWLNATIQNPILGECTLKDDAGYQCVIRQVTLDSNVRDLGTSTEFTIKGDFYPN
>Mature_70_residues
PAVIKVPILKTSPSHEIWLNATIQNPILGECTLKDDAGYQCVIRQVTLDSNVRDLGTSTEFTIKGDFYPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7878; Mature: 7747

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVIKVPILKTSPSHEIWLNATIQNPILGECTLKDDAGYQCVIRQVTLDSNVRDLGTST
CCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCC
EFTIKGDFYPN
EEEEECCCCCC
>Mature Secondary Structure 
PAVIKVPILKTSPSHEIWLNATIQNPILGECTLKDDAGYQCVIRQVTLDSNVRDLGTST
CCEEEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCC
EFTIKGDFYPN
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA