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The map label for this gene is hydE [H]

Identifier: 109947316

GI number: 109947316

Start: 656730

End: 658280

Strand: Direct

Name: hydE [H]

Synonym: Hac_0748

Alternate gene names: 109947316

Gene position: 656730-658280 (Clockwise)

Preceding gene: 109947315

Following gene: 109947319

Centisome position: 42.26

GC content: 34.62

Gene sequence:

>1551_bases
GTGTTTGTTTTTCTTTTTAAATGCGTTGATGAAAAAACAAACTTGATTTTTACGCCCCTTTTAGAGCAAATGGCACTCAA
TTTACAAGCGGGTTTTTATAGCGTTTATAAGGATAAGATAACTTCTTTTTACCTCCAAGCGAGTGCTGAAACCACTTTAG
AATTCGCGCAAAAACTCAGCGTTGTTTTACCCTTTTCTTTAGATTTTAGTTTTTTGTCTTTAAGCGAAAACACAGAGCCT
TTAGACGAAGATCTTTTCCAAACAACAAGCCTTTCAAAATCCCTTTTTATGAACGCTAAAGAGCATCAAGATTTTTTGGA
TAAAAACACATCTTTGTATGCCAATACTTTAGGTTTTGTTACAAATACGGCTTTTAAGGGGAATACAATCCATAGCCCTA
AAGAGCTTATAGATTGCTTAACGCAATTAAAAGAGATGCTTAAAACACAAGATTTTATAACTATCCACACTTCTAGGGGG
GTGTTATCCCTTTCTTTAAACAAGCCTTCTCAAAGCGTTATTTTTAGCGCTCTTTCTAGCGTTTTAACCTACACTAAATT
GCTTTTAGAAGACGCTAAATACTTGGCCAGTTTGGAAAAACCCTCTATCAAAGCCCATTTAAAAAGCGTGTTTAAGGATA
CTTTTAAAAATGATGAAATTATAGCCCAATTGCCCTATGAACCTATATTAAATTTATTGTGCCATATTTTACAAGATGAG
GGTATAGAATTTGTTTTTGCACATAAAAACAATTTTTGTGAAAACAATTCTTGTGAAGCGCTTTTAAGTTATGAAACGCT
TTTTAAAACCCCTAACCGCTTGATTGTGCCCACTAAAAAATTCGTGCTAGAAAACAATCTTGCTCCCATTTCTTTTAAAG
ATGAGCTAGAGTTTTTAAGCACAACGCCGCATTCCATTATTGTGTATATTAGTTTCAAACACCCTACAAGGCTATTATTG
CATGCTAATGGCTCTTTAAAAACGCTTTTAAACACTAGGTTTGATTTCAATGAAATGTTTAATCTTCTCAAACAAGATGA
AAAAGCCTCTAGAATGCTACAAAACTACGAGGCTAAATTCCCTAATTTTTATGCGCATTTTTTAGAGCTTTCCAAACATC
AGCTAGGGGGCACGAATTTATTGGATTTTTTTCAAATTTTGGGGTTTGTTTTAGGGTATAGCGAGGATTTTCATGCACAT
AGCGTTATTTCTTTGGCGAAAGAATGCTTACGCCCTAAAGGCCCTAGAATTGATTATAAAATCCTTAAAGACGATTCTTG
GAAAATGGCTTTAAATTTTTCAAAAATCATGCACAGTGCGATGAGTTTTAGGCTCGCAGGCGTGGAGAATGAAATTTTGA
GTTTGGGGATTTTGGATTCTTTAGCGGAGTTTTTAGGGAATTTCATTTGGGATAATGCACAAAATTTCAGCGTCCAAGAA
GTGATTATTGCTGGGGATTTCTTTGGCGAAAAAGTATTTTTGGATTTGTTTGTGCAATATTTCCCCAAAACCCTAACCCT
TAAAGTGCATGAGTTTTTGGACTATGAATAG

Upstream 100 bases:

>100_bases
ATAGAAACCCAACTAAAAGCATGGGGAGTGGGTATGCAACGCACAAATAATATTGCATTAGATTGTATCGCTGAACTTTC
CTACAAGGGTTTTTGAATTG

Downstream 100 bases:

>100_bases
GGGGCTTAAAAACGGATGTGCATCATCACTCCGCCATCCATGTGTTGGGTTTTTTTGCTTTTAGTCCTTTCAAAATAAGG
CCCAAAAGACAGGGTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MFVFLFKCVDEKTNLIFTPLLEQMALNLQAGFYSVYKDKITSFYLQASAETTLEFAQKLSVVLPFSLDFSFLSLSENTEP
LDEDLFQTTSLSKSLFMNAKEHQDFLDKNTSLYANTLGFVTNTAFKGNTIHSPKELIDCLTQLKEMLKTQDFITIHTSRG
VLSLSLNKPSQSVIFSALSSVLTYTKLLLEDAKYLASLEKPSIKAHLKSVFKDTFKNDEIIAQLPYEPILNLLCHILQDE
GIEFVFAHKNNFCENNSCEALLSYETLFKTPNRLIVPTKKFVLENNLAPISFKDELEFLSTTPHSIIVYISFKHPTRLLL
HANGSLKTLLNTRFDFNEMFNLLKQDEKASRMLQNYEAKFPNFYAHFLELSKHQLGGTNLLDFFQILGFVLGYSEDFHAH
SVISLAKECLRPKGPRIDYKILKDDSWKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQE
VIIAGDFFGEKVFLDLFVQYFPKTLTLKVHEFLDYE

Sequences:

>Translated_516_residues
MFVFLFKCVDEKTNLIFTPLLEQMALNLQAGFYSVYKDKITSFYLQASAETTLEFAQKLSVVLPFSLDFSFLSLSENTEP
LDEDLFQTTSLSKSLFMNAKEHQDFLDKNTSLYANTLGFVTNTAFKGNTIHSPKELIDCLTQLKEMLKTQDFITIHTSRG
VLSLSLNKPSQSVIFSALSSVLTYTKLLLEDAKYLASLEKPSIKAHLKSVFKDTFKNDEIIAQLPYEPILNLLCHILQDE
GIEFVFAHKNNFCENNSCEALLSYETLFKTPNRLIVPTKKFVLENNLAPISFKDELEFLSTTPHSIIVYISFKHPTRLLL
HANGSLKTLLNTRFDFNEMFNLLKQDEKASRMLQNYEAKFPNFYAHFLELSKHQLGGTNLLDFFQILGFVLGYSEDFHAH
SVISLAKECLRPKGPRIDYKILKDDSWKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQE
VIIAGDFFGEKVFLDLFVQYFPKTLTLKVHEFLDYE
>Mature_516_residues
MFVFLFKCVDEKTNLIFTPLLEQMALNLQAGFYSVYKDKITSFYLQASAETTLEFAQKLSVVLPFSLDFSFLSLSENTEP
LDEDLFQTTSLSKSLFMNAKEHQDFLDKNTSLYANTLGFVTNTAFKGNTIHSPKELIDCLTQLKEMLKTQDFITIHTSRG
VLSLSLNKPSQSVIFSALSSVLTYTKLLLEDAKYLASLEKPSIKAHLKSVFKDTFKNDEIIAQLPYEPILNLLCHILQDE
GIEFVFAHKNNFCENNSCEALLSYETLFKTPNRLIVPTKKFVLENNLAPISFKDELEFLSTTPHSIIVYISFKHPTRLLL
HANGSLKTLLNTRFDFNEMFNLLKQDEKASRMLQNYEAKFPNFYAHFLELSKHQLGGTNLLDFFQILGFVLGYSEDFHAH
SVISLAKECLRPKGPRIDYKILKDDSWKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQE
VIIAGDFFGEKVFLDLFVQYFPKTLTLKVHEFLDYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59099; Mature: 59099

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVFLFKCVDEKTNLIFTPLLEQMALNLQAGFYSVYKDKITSFYLQASAETTLEFAQKLS
CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
VVLPFSLDFSFLSLSENTEPLDEDLFQTTSLSKSLFMNAKEHQDFLDKNTSLYANTLGFV
EEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
TNTAFKGNTIHSPKELIDCLTQLKEMLKTQDFITIHTSRGVLSLSLNKPSQSVIFSALSS
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHH
VLTYTKLLLEDAKYLASLEKPSIKAHLKSVFKDTFKNDEIIAQLPYEPILNLLCHILQDE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCC
GIEFVFAHKNNFCENNSCEALLSYETLFKTPNRLIVPTKKFVLENNLAPISFKDELEFLS
CCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCHHHHHHHH
TTPHSIIVYISFKHPTRLLLHANGSLKTLLNTRFDFNEMFNLLKQDEKASRMLQNYEAKF
CCCCEEEEEEEECCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCC
PNFYAHFLELSKHQLGGTNLLDFFQILGFVLGYSEDFHAHSVISLAKECLRPKGPRIDYK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
ILKDDSWKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQE
EECCCCCEEEEEHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
VIIAGDFFGEKVFLDLFVQYFPKTLTLKVHEFLDYE
EEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCC
>Mature Secondary Structure
MFVFLFKCVDEKTNLIFTPLLEQMALNLQAGFYSVYKDKITSFYLQASAETTLEFAQKLS
CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
VVLPFSLDFSFLSLSENTEPLDEDLFQTTSLSKSLFMNAKEHQDFLDKNTSLYANTLGFV
EEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
TNTAFKGNTIHSPKELIDCLTQLKEMLKTQDFITIHTSRGVLSLSLNKPSQSVIFSALSS
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHH
VLTYTKLLLEDAKYLASLEKPSIKAHLKSVFKDTFKNDEIIAQLPYEPILNLLCHILQDE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCC
GIEFVFAHKNNFCENNSCEALLSYETLFKTPNRLIVPTKKFVLENNLAPISFKDELEFLS
CCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCHHHHHHHH
TTPHSIIVYISFKHPTRLLLHANGSLKTLLNTRFDFNEMFNLLKQDEKASRMLQNYEAKF
CCCCEEEEEEEECCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCC
PNFYAHFLELSKHQLGGTNLLDFFQILGFVLGYSEDFHAHSVISLAKECLRPKGPRIDYK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
ILKDDSWKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQE
EECCCCCEEEEEHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
VIIAGDFFGEKVFLDLFVQYFPKTLTLKVHEFLDYE
EEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639603; 14500908; 1587288 [H]