Click here to switch to the map view.

The map label for this gene is 109947298

Identifier: 109947298

GI number: 109947298

Start: 637989

End: 638333

Strand: Direct

Name: 109947298

Synonym: Hac_0727

Alternate gene names: NA

Gene position: 637989-638333 (Clockwise)

Preceding gene: 109947297

Following gene: 109947299

Centisome position: 41.06

GC content: 31.3

Gene sequence:

>345_bases
ATGCGTTTTTTCAATAACAAGCATAAAGAAAAGGGCTTAAAGGCTGAAGAAGAAGCTTGCGAGTTTTTAAAAACGCTGGG
TTTTGAAATAATAGAAAGGAACTTTTTTTCAAAATTTGGCGAAATTGATATCATCGCTTTTAAAAAGGGGGTTTTGCATT
TCATTGAAGTCAAAAGCGGGGAAAATTTTGATCCTATTTATGCGATCACGCCAAGTAAATTACAAAAAATAATTCAAACG
ATCCGCTATTATTTGTCTCAAAAAGATCCTAATAGTGATTTTTGCATTGACGCTCTCATTGTGAAAAATGGTAAATTTGA
ACTTTTAGAAAATATCACTTTTTAG

Upstream 100 bases:

>100_bases
GCACACCACGAATGAAAAATCGCTTTTAAACGCCCTAAAAGAGCTTGAAAATTTAAAAAGCGTGTTGGATACCCCTAAAA
TGATCCGCTTGGAAAATTGA

Downstream 100 bases:

>100_bases
ACTTATTTAAAATAAAAGACTTTGCATTAACATTCTCAAGCTAGTATTATTATCGTTAATCAAAATCACATATTTAGGAG
TAACTAATGAGTCACTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRFFNNKHKEKGLKAEEEACEFLKTLGFEIIERNFFSKFGEIDIIAFKKGVLHFIEVKSGENFDPIYAITPSKLQKIIQT
IRYYLSQKDPNSDFCIDALIVKNGKFELLENITF

Sequences:

>Translated_114_residues
MRFFNNKHKEKGLKAEEEACEFLKTLGFEIIERNFFSKFGEIDIIAFKKGVLHFIEVKSGENFDPIYAITPSKLQKIIQT
IRYYLSQKDPNSDFCIDALIVKNGKFELLENITF
>Mature_114_residues
MRFFNNKHKEKGLKAEEEACEFLKTLGFEIIERNFFSKFGEIDIIAFKKGVLHFIEVKSGENFDPIYAITPSKLQKIIQT
IRYYLSQKDPNSDFCIDALIVKNGKFELLENITF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13333; Mature: 13333

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFNNKHKEKGLKAEEEACEFLKTLGFEIIERNFFSKFGEIDIIAFKKGVLHFIEVKSG
CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHEEEEEECCC
ENFDPIYAITPSKLQKIIQTIRYYLSQKDPNSDFCIDALIVKNGKFELLENITF
CCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHCCCC
>Mature Secondary Structure
MRFFNNKHKEKGLKAEEEACEFLKTLGFEIIERNFFSKFGEIDIIAFKKGVLHFIEVKSG
CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHEEEEEECCC
ENFDPIYAITPSKLQKIIQTIRYYLSQKDPNSDFCIDALIVKNGKFELLENITF
CCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA