| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is proWX [H]
Identifier: 109947293
GI number: 109947293
Start: 631980
End: 633635
Strand: Direct
Name: proWX [H]
Synonym: Hac_0721
Alternate gene names: 109947293
Gene position: 631980-633635 (Clockwise)
Preceding gene: 109947292
Following gene: 109947294
Centisome position: 40.67
GC content: 38.59
Gene sequence:
>1656_bases ATGCTGATCATGGGCGTTTTTAAACAATTGATCAAAGAATTGTATGAATGGTTGATCCATTCTGTGGATGTGGCTATACA ACATTTAGTTGCAATGGTGTTAAAGATAAGCGTGGTAAAATATTTGATAAAAGAATTTCATGATCGCTTTATTTATTTTA TAGATTTAATTGCACAGCATTTTATCATCGTTTCGCTTTCTGGTCTTATCGTGTTGGTGTTTGGGGTTTTGATTGGGGTT TTTGTGTTTTACAATTCAAAGGCTAGGGTCTTTTTACTCCCTGTGGTGAATTTTCTCTACACGATCCCTTCGCTGGCACT ATTTGCGTTATTCATCCCTTTGATTGGGGTGGGGTTAAAAAACGCCCTTTTAGTGTTGGTCTTATACGGCTTATTACCCA TTGTCCATAGCACTTATAACGCCTTAAAAGAGGTGAGAGAGGAAGTCATTAAGGCCGCCATTGGGCTAGGGTGTAACCCC AAAGAGTTGTTTTTTAGGGTGCGATTTTTACTTGCTATCCCCCAAATTTTAGTGGGCTTAAGGATTGCGGTGGTGATGTT AGTGGCGATGGCTGGGATTGGAGCACTCATTGGGGCTGGGGGATTAGGGCAAGCGATTTTTAGAGGGCTAAACACACAAA ATACCACGCTTTTAGTGGCGGGTAGTTTTATTATTGCGGTTTTTAGTGTTTTAGCGGATAAATTTGTGAGCGTGTTTCAG CATGAAAACGCCTTGCAACACCTGCTTTCTCAAAACGCCACCAAAAAACAAAAAAGAAGAGTTTATGTTAGTGTGGCGGT ATTCCTCTTTTTATTACTAGCGAGTATATTATGGCTAGTGCCTAGAAGCGTTATAGAAGAAAAGCCTTTAGTCGTGGCGG CAAAACCTAGCAGCGAGCAGTATATTTTGGGCGAGATTTTAAGCCTTTTGTTAGAAAAACACCATATTCCTGTTAAGCGA GTGTTTGGCATTGGTGGGGGGACGATGAATATCCATCCGGCATTAATTAGGGGCGATTTTGATTTGTATGTGGAATATAC CGGCACCGCTTGGGTGAATACGCTCAAAAACCCTTTGACTCAAAAAGTGGATTTTGAAACGATTAAAAGGCGTTATGAGA AAGAATTTAATCTTTTATGGGTGGGGCTTTTGGGCTTTAATAACACCTATTCCTTAGCGATTTCTAAAGAGGACGCTCAA AAATACGCTGTTGAAACTTTTAGCGATTTAGCCTTTCATAGCCCAAATTTTGATTTTGGCGCGGAGTTTGACTTTTTTGA AAGAGAGGACGCTTTTAAGGGCTTAGTGAAAGCCTATCGCTTTCATTTTAGAAGTTTGCATGAAATGGATATTAACTTGC GTTATAAAAGTTTTGAATCCCATAAAATCAACGCTTTAGATGTCTTCACTACAGACGCTCAAATCAAAGAGCTTGATTTG AAGGTGCTTAGAGACGATAAAGGATTTTTCCCTAATTATCAAGCCGGTATTGTCATAAGAAAAGAAATTGTCAAAAAATA TCCTAAAGTGTTAGAAATCTTAGAAAAAATAAAGATCAGCGATGAAAAAATGCAAGATTTAAACTATCAGGTGGAAGTGT TGAAAAAAAGCCCCCAAATAGTAGCTAAAGATTTTTTAGAAAACATGGGGCTATAA
Upstream 100 bases:
>100_bases CCAATTTAGGCAAACGAACCTTTCAATTTTAACTTGCAACCAACATTAAAGAATGCCTTTAGCATTTTAAGACACCTTTA TTAGAATAAGTTTGGTTATA
Downstream 100 bases:
>100_bases AACATGAAAGAAATCATTAAAATAGAGAATTTATCTTTTAACTACCACAATCGTGCAATTTTTAAAGATTTTAATTTAAG TATTGAAGAAGGGGATTTTT
Product: osmoprotection protein
Products: NA
Alternate protein names: Osmoprotectant-binding protein [H]
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MLIMGVFKQLIKELYEWLIHSVDVAIQHLVAMVLKISVVKYLIKEFHDRFIYFIDLIAQHFIIVSLSGLIVLVFGVLIGV FVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNP KELFFRVRFLLAIPQILVGLRIAVVMLVAMAGIGALIGAGGLGQAIFRGLNTQNTTLLVAGSFIIAVFSVLADKFVSVFQ HENALQHLLSQNATKKQKRRVYVSVAVFLFLLLASILWLVPRSVIEEKPLVVAAKPSSEQYILGEILSLLLEKHHIPVKR VFGIGGGTMNIHPALIRGDFDLYVEYTGTAWVNTLKNPLTQKVDFETIKRRYEKEFNLLWVGLLGFNNTYSLAISKEDAQ KYAVETFSDLAFHSPNFDFGAEFDFFEREDAFKGLVKAYRFHFRSLHEMDINLRYKSFESHKINALDVFTTDAQIKELDL KVLRDDKGFFPNYQAGIVIRKEIVKKYPKVLEILEKIKISDEKMQDLNYQVEVLKKSPQIVAKDFLENMGL
Sequences:
>Translated_551_residues MLIMGVFKQLIKELYEWLIHSVDVAIQHLVAMVLKISVVKYLIKEFHDRFIYFIDLIAQHFIIVSLSGLIVLVFGVLIGV FVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNP KELFFRVRFLLAIPQILVGLRIAVVMLVAMAGIGALIGAGGLGQAIFRGLNTQNTTLLVAGSFIIAVFSVLADKFVSVFQ HENALQHLLSQNATKKQKRRVYVSVAVFLFLLLASILWLVPRSVIEEKPLVVAAKPSSEQYILGEILSLLLEKHHIPVKR VFGIGGGTMNIHPALIRGDFDLYVEYTGTAWVNTLKNPLTQKVDFETIKRRYEKEFNLLWVGLLGFNNTYSLAISKEDAQ KYAVETFSDLAFHSPNFDFGAEFDFFEREDAFKGLVKAYRFHFRSLHEMDINLRYKSFESHKINALDVFTTDAQIKELDL KVLRDDKGFFPNYQAGIVIRKEIVKKYPKVLEILEKIKISDEKMQDLNYQVEVLKKSPQIVAKDFLENMGL >Mature_551_residues MLIMGVFKQLIKELYEWLIHSVDVAIQHLVAMVLKISVVKYLIKEFHDRFIYFIDLIAQHFIIVSLSGLIVLVFGVLIGV FVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLKNALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNP KELFFRVRFLLAIPQILVGLRIAVVMLVAMAGIGALIGAGGLGQAIFRGLNTQNTTLLVAGSFIIAVFSVLADKFVSVFQ HENALQHLLSQNATKKQKRRVYVSVAVFLFLLLASILWLVPRSVIEEKPLVVAAKPSSEQYILGEILSLLLEKHHIPVKR VFGIGGGTMNIHPALIRGDFDLYVEYTGTAWVNTLKNPLTQKVDFETIKRRYEKEFNLLWVGLLGFNNTYSLAISKEDAQ KYAVETFSDLAFHSPNFDFGAEFDFFEREDAFKGLVKAYRFHFRSLHEMDINLRYKSFESHKINALDVFTTDAQIKELDL KVLRDDKGFFPNYQAGIVIRKEIVKKYPKVLEILEKIKISDEKMQDLNYQVEVLKKSPQIVAKDFLENMGL
Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]
COG id: COG1732
COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788451, Length=239, Percent_Identity=33.0543933054393, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1788452, Length=285, Percent_Identity=26.3157894736842, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1788449, Length=203, Percent_Identity=31.0344827586207, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789033, Length=200, Percent_Identity=23.5, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 62480; Mature: 62480
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIMGVFKQLIKELYEWLIHSVDVAIQHLVAMVLKISVVKYLIKEFHDRFIYFIDLIAQH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIIVSLSGLIVLVFGVLIGVFVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RIAVVMLVAMAGIGALIGAGGLGQAIFRGLNTQNTTLLVAGSFIIAVFSVLADKFVSVFQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH HENALQHLLSQNATKKQKRRVYVSVAVFLFLLLASILWLVPRSVIEEKPLVVAAKPSSEQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEECCCCCC YILGEILSLLLEKHHIPVKRVFGIGGGTMNIHPALIRGDFDLYVEYTGTAWVNTLKNPLT CHHHHHHHHHHHHCCCCHHHHHCCCCCCCEECCEEEECCEEEEEEECCHHHHHHHHHHHH QKVDFETIKRRYEKEFNLLWVGLLGFNNTYSLAISKEDAQKYAVETFSDLAFHSPNFDFG HCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC AEFDFFEREDAFKGLVKAYRFHFRSLHEMDINLRYKSFESHKINALDVFTTDAQIKELDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCHHHHHHH KVLRDDKGFFPNYQAGIVIRKEIVKKYPKVLEILEKIKISDEKMQDLNYQVEVLKKSPQI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCHHH VAKDFLENMGL HHHHHHHHCCC >Mature Secondary Structure MLIMGVFKQLIKELYEWLIHSVDVAIQHLVAMVLKISVVKYLIKEFHDRFIYFIDLIAQH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIIVSLSGLIVLVFGVLIGVFVFYNSKARVFLLPVVNFLYTIPSLALFALFIPLIGVGLK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVRFLLAIPQILVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RIAVVMLVAMAGIGALIGAGGLGQAIFRGLNTQNTTLLVAGSFIIAVFSVLADKFVSVFQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH HENALQHLLSQNATKKQKRRVYVSVAVFLFLLLASILWLVPRSVIEEKPLVVAAKPSSEQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEECCCCCC YILGEILSLLLEKHHIPVKRVFGIGGGTMNIHPALIRGDFDLYVEYTGTAWVNTLKNPLT CHHHHHHHHHHHHCCCCHHHHHCCCCCCCEECCEEEECCEEEEEEECCHHHHHHHHHHHH QKVDFETIKRRYEKEFNLLWVGLLGFNNTYSLAISKEDAQKYAVETFSDLAFHSPNFDFG HCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC AEFDFFEREDAFKGLVKAYRFHFRSLHEMDINLRYKSFESHKINALDVFTTDAQIKELDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCHHHHHHH KVLRDDKGFFPNYQAGIVIRKEIVKKYPKVLEILEKIKISDEKMQDLNYQVEVLKKSPQI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCHHH VAKDFLENMGL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10216873; 9384377 [H]