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The map label for this gene is omp6 fragment 1

Identifier: 109947286

GI number: 109947286

Start: 627521

End: 627931

Strand: Direct

Name: omp6 fragment 1

Synonym: Hac_0713

Alternate gene names: NA

Gene position: 627521-627931 (Clockwise)

Preceding gene: 109947285

Following gene: 109947287

Centisome position: 40.38

GC content: 37.96

Gene sequence:

>411_bases
TTGCTTTATCTTAATGGTTTCAATACGGATTTGCTGATTAATTGGAAGAACGATAAACTCTCTAGTGGGAGAAACTCCAA
CGACTTAAGAAGACTTAGTCAAACGCAAGGTGGGGGTGCAATTTTAGAAGATTTACAACGATACCCTAATCCATTCTCTG
CTATGATCGGCGCTAAAGTTTTTCAAAATAGAAATGTGCATCTGTTTAGGAAATCTTTAGGACTTGTGGTTGGCATGGAT
ATAGGGGCTAGCGCTTGGTTTCAAAATAGCAATTTTAACCTTTTTGACCAAGTCAATAACCGCACTATCTTTCAATTATC
AGGAAAATATCAGGAAAATTTGGCATCCGTTGGAATACTGAAGAATACGGCTTTGATAAAAATGGTGGTGAATCCATCTT
GGAGGCAGTAG

Upstream 100 bases:

>100_bases
ACACACAAAAAAATAGGCGGTGTGTCGGTTTAATGCTAGTTAGCCTCTAGCAACGCTCCTAATCTTGATAACCGCAGCTG
CAATATAGATTTTTGGGCAC

Downstream 100 bases:

>100_bases
TATTGAATTAGGGGTTAAAGTGCCAGCGTTTAAAGTCAATTTCTATCGCAATAATTATGGGGATAAATTGGATTATAAAA
GAGTGGTGAGCGTTTATCTC

Product: outer membrane protein 6 fragment 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLYLNGFNTDLLINWKNDKLSSGRNSNDLRRLSQTQGGGAILEDLQRYPNPFSAMIGAKVFQNRNVHLFRKSLGLVVGMD
IGASAWFQNSNFNLFDQVNNRTIFQLSGKYQENLASVGILKNTALIKMVVNPSWRQ

Sequences:

>Translated_136_residues
MLYLNGFNTDLLINWKNDKLSSGRNSNDLRRLSQTQGGGAILEDLQRYPNPFSAMIGAKVFQNRNVHLFRKSLGLVVGMD
IGASAWFQNSNFNLFDQVNNRTIFQLSGKYQENLASVGILKNTALIKMVVNPSWRQ
>Mature_136_residues
MLYLNGFNTDLLINWKNDKLSSGRNSNDLRRLSQTQGGGAILEDLQRYPNPFSAMIGAKVFQNRNVHLFRKSLGLVVGMD
IGASAWFQNSNFNLFDQVNNRTIFQLSGKYQENLASVGILKNTALIKMVVNPSWRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15382; Mature: 15382

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLNGFNTDLLINWKNDKLSSGRNSNDLRRLSQTQGGGAILEDLQRYPNPFSAMIGAKV
CEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
FQNRNVHLFRKSLGLVVGMDIGASAWFQNSNFNLFDQVNNRTIFQLSGKYQENLASVGIL
HCCCCEEEEECCCCEEEEECCCCCEEEECCCCCEEECCCCCEEEEECCCHHHHHHHHCEE
KNTALIKMVVNPSWRQ
CCCEEEEEEECCCCCC
>Mature Secondary Structure
MLYLNGFNTDLLINWKNDKLSSGRNSNDLRRLSQTQGGGAILEDLQRYPNPFSAMIGAKV
CEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
FQNRNVHLFRKSLGLVVGMDIGASAWFQNSNFNLFDQVNNRTIFQLSGKYQENLASVGIL
HCCCCEEEEECCCCEEEEECCCCCEEEECCCCCEEECCCCCEEEEECCCHHHHHHHHCEE
KNTALIKMVVNPSWRQ
CCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA