| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947243
Identifier: 109947243
GI number: 109947243
Start: 584572
End: 585759
Strand: Reverse
Name: 109947243
Synonym: Hac_0668
Alternate gene names: NA
Gene position: 585759-584572 (Counterclockwise)
Preceding gene: 109947244
Following gene: 109947242
Centisome position: 37.7
GC content: 37.21
Gene sequence:
>1188_bases GTGTTTTTGTTAGCCACCTTATTATTAGCTAACACGCAAAAAGTGAGCGATATTGCCAAAGATATTCAAAACAAAAAAAC CCTCTTGAAAAAAACCCATGAAGAAAAATTGCAATTAAACAGCCGTTTGAGTTCTTTAGGTGAAGCGATCCGTTCTAAAG AGCGCCAAAAAGTTGAGATTGAGCGTCAAATGACGGCTTTAAAAAAGAATCTTGAAAAGAATCGTAACGAAAGTTTGGCA CAAGAAAAAGTCCTCACTAACTACCGCGAGTCTTTGGATAATTTACAAAAACAACGATCGTTTTTACAAAAAAGAGTCTT TGACACGCTTTTGCAAGATTTTCTTTTTTCGCAAGCCTTAAAGGGGCAGGATTTAGCCTCTTCTAATGATGTTATTTTGC AAGTGGCGTTTGAAAACTTGCACCAAAACACCCTATCTAAAATGTCGCAATTAAGCCAAGAAGAAAAAGAACTCAACACG CAAGCCTTAAAAGTCAAAAGCAGTATCCAAAAAATCTCATCTATCATAGATGCACAAAAAACTCGTGAAGTAACCTTAAA ATCCTTACAAACCGAACAAAACAAGCTCATTTTGAGCATGCAAAAAGATTATGCGATCTATAACCAACGATTAACGCTTT TAGATAAAGAGCGCCAGAATTTAAACGCCCTATTGAAACGCTTGAATATCATCAAGCAAACTAGAGAAAATGAAGAAAAA GCCAACCTTAAAAAATCTTCTCATGCATTAGAAGTCAAGCAAGTGGCGAGCTCTTATCAAAATATCAACACCACGAGCTA TAATGGGCCAAAAACGATCGCTCCCTTGAATGATTATGAAGTGGTGCAAAAATTTGGCCCTTATATTGACCCAGTTTATA ATTTAAAAATTTTTAGCGAATCCATCACGCTTGTGTCAAAAACCCCAAACGCTTTGGTGCGTAATGTTCTAGACGGAAAA ATCGTGTTCGCTAAAGAAATCAACATGCTTAAAAAAGTCGTTATCGTTGAGCATAAAAACGGCATCCGCACGATTTATTC CCAATTGGATAAAATCGCCCCCACCATTAAAAGCGGCATGCGCATCCAAAAAGGCTATGTTTTAGGGCGCATTGAGCAAC GATTAGGCTTTGAAGTCACCATGAAAGAAAAACACATTAACCCTTTAGAACTCATTGCGCGCAATTAA
Upstream 100 bases:
>100_bases TTTTAAATAATTTTTTATGGGGATTGCTTTTTAGCCTTGTGGTCTCATTTATTTCTGTTTTACTTGTAGCTTGGAGAACC AAATTATGTATAAATTAGGG
Downstream 100 bases:
>100_bases GATTTAACAAATCGTCTTTTTGCCGATATTTACTGTGAAATTGAACAAAAGGATGGTCATGCACATGGGCATGCAAAAAA TTTGGAGGTTTTTATGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase M; Peptidase; Metallopeptidase; Transaldolase; M23 Peptidase Domain Protein
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MFLLATLLLANTQKVSDIAKDIQNKKTLLKKTHEEKLQLNSRLSSLGEAIRSKERQKVEIERQMTALKKNLEKNRNESLA QEKVLTNYRESLDNLQKQRSFLQKRVFDTLLQDFLFSQALKGQDLASSNDVILQVAFENLHQNTLSKMSQLSQEEKELNT QALKVKSSIQKISSIIDAQKTREVTLKSLQTEQNKLILSMQKDYAIYNQRLTLLDKERQNLNALLKRLNIIKQTRENEEK ANLKKSSHALEVKQVASSYQNINTTSYNGPKTIAPLNDYEVVQKFGPYIDPVYNLKIFSESITLVSKTPNALVRNVLDGK IVFAKEINMLKKVVIVEHKNGIRTIYSQLDKIAPTIKSGMRIQKGYVLGRIEQRLGFEVTMKEKHINPLELIARN
Sequences:
>Translated_395_residues MFLLATLLLANTQKVSDIAKDIQNKKTLLKKTHEEKLQLNSRLSSLGEAIRSKERQKVEIERQMTALKKNLEKNRNESLA QEKVLTNYRESLDNLQKQRSFLQKRVFDTLLQDFLFSQALKGQDLASSNDVILQVAFENLHQNTLSKMSQLSQEEKELNT QALKVKSSIQKISSIIDAQKTREVTLKSLQTEQNKLILSMQKDYAIYNQRLTLLDKERQNLNALLKRLNIIKQTRENEEK ANLKKSSHALEVKQVASSYQNINTTSYNGPKTIAPLNDYEVVQKFGPYIDPVYNLKIFSESITLVSKTPNALVRNVLDGK IVFAKEINMLKKVVIVEHKNGIRTIYSQLDKIAPTIKSGMRIQKGYVLGRIEQRLGFEVTMKEKHINPLELIARN >Mature_395_residues MFLLATLLLANTQKVSDIAKDIQNKKTLLKKTHEEKLQLNSRLSSLGEAIRSKERQKVEIERQMTALKKNLEKNRNESLA QEKVLTNYRESLDNLQKQRSFLQKRVFDTLLQDFLFSQALKGQDLASSNDVILQVAFENLHQNTLSKMSQLSQEEKELNT QALKVKSSIQKISSIIDAQKTREVTLKSLQTEQNKLILSMQKDYAIYNQRLTLLDKERQNLNALLKRLNIIKQTRENEEK ANLKKSSHALEVKQVASSYQNINTTSYNGPKTIAPLNDYEVVQKFGPYIDPVYNLKIFSESITLVSKTPNALVRNVLDGK IVFAKEINMLKKVVIVEHKNGIRTIYSQLDKIAPTIKSGMRIQKGYVLGRIEQRLGFEVTMKEKHINPLELIARN
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45380; Mature: 45380
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLATLLLANTQKVSDIAKDIQNKKTLLKKTHEEKLQLNSRLSSLGEAIRSKERQKVEI CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERQMTALKKNLEKNRNESLAQEKVLTNYRESLDNLQKQRSFLQKRVFDTLLQDFLFSQAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGQDLASSNDVILQVAFENLHQNTLSKMSQLSQEEKELNTQALKVKSSIQKISSIIDAQK CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREVTLKSLQTEQNKLILSMQKDYAIYNQRLTLLDKERQNLNALLKRLNIIKQTRENEEK HHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ANLKKSSHALEVKQVASSYQNINTTSYNGPKTIAPLNDYEVVQKFGPYIDPVYNLKIFSE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHEEECC SITLVSKTPNALVRNVLDGKIVFAKEINMLKKVVIVEHKNGIRTIYSQLDKIAPTIKSGM HHHHHCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCC RIQKGYVLGRIEQRLGFEVTMKEKHINPLELIARN EEHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHCCC >Mature Secondary Structure MFLLATLLLANTQKVSDIAKDIQNKKTLLKKTHEEKLQLNSRLSSLGEAIRSKERQKVEI CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERQMTALKKNLEKNRNESLAQEKVLTNYRESLDNLQKQRSFLQKRVFDTLLQDFLFSQAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGQDLASSNDVILQVAFENLHQNTLSKMSQLSQEEKELNTQALKVKSSIQKISSIIDAQK CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREVTLKSLQTEQNKLILSMQKDYAIYNQRLTLLDKERQNLNALLKRLNIIKQTRENEEK HHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ANLKKSSHALEVKQVASSYQNINTTSYNGPKTIAPLNDYEVVQKFGPYIDPVYNLKIFSE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHEEECC SITLVSKTPNALVRNVLDGKIVFAKEINMLKKVVIVEHKNGIRTIYSQLDKIAPTIKSGM HHHHHCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCC RIQKGYVLGRIEQRLGFEVTMKEKHINPLELIARN EEHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA