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The map label for this gene is ftsY [H]

Identifier: 109947230

GI number: 109947230

Start: 573198

End: 574079

Strand: Reverse

Name: ftsY [H]

Synonym: Hac_0653

Alternate gene names: 109947230

Gene position: 574079-573198 (Counterclockwise)

Preceding gene: 109947231

Following gene: 109947223

Centisome position: 36.94

GC content: 39.57

Gene sequence:

>882_bases
ATGTTTAATTTTTTCAAAAAAATTGTCAATAAAATCAAGGGTGAAGAGGCTAAAGAAAAAAAGCGTGAAAGCGTTCCTAA
AGAGGAATTAGAAGAAATTTTGATTGGCTTTGACATTCAATACGATTTAATAGAGAGTTTGTTAAAGCATTTAGGCGATT
TAATTACGCCCAAGCAATTAGAAGTCGCTTTGTTGCGTTTTGTGCGTGGGGAAAGCTATTATGACAAAACACGCCTAAAA
ACCATCACCACAAAACCCTTAGTGCATTTAATCGTAGGGGTTAATGGGGCGGGTAAAACCACAACCATCGCTAAATTAGC
CAAGCTCTCTTTAAAACAGCATAAAAAAGCGCTTTTAGGGGCAGGCGATACCTTTAGAGCGGCCGCAGTCAAACAGCTCC
AGTTATGGGGCAAAAAGCTTAACATTCAAGTCATTAGTGCTAAAGAAGGGAGTGATCCAAGCTCTCTAGCTTACAACACC
ATAGAAAGTGCAATCGCTAAAAATATAGATGAAGTCTTTATAGACACCGCTGGACGCTTGCACAACCAAACCAATCTCAA
AAACGAGCTTTCTAAGATCGCACGCACCTGCTCTAAAGTTTTAAAAGACGCCCCCTTTTATAAATTCCTTATTTTAGATG
GCACGCAAGGGAGTTCTGGACTCACTCAAGCGAAAATTTTCCATGAAACTTTGGCGTTAGATGGCGTGATTATGACTAAG
CTTGATGGCACTTCTAAAGGCGGAGCGATTTTAAGCGTACTGTATGAGTTGAAATTACCCATTCTTTATTTAGGAATGGG
CGAAAAAGAAGACGATTTGATCGCTTTTGATGAAGAATGCTTTATAGAAGACTTGGTTGATGCGGTGTTTGTGGAGTCAT
GA

Upstream 100 bases:

>100_bases
TGCTTTTATACCACAAACACCAACTTATCAATATCTATCAAGGGATCGTGCCAGTAGAAATGCTCCAATTTGATATTTCC
AACTTAAAGGACTAATAACC

Downstream 100 bases:

>100_bases
AATTTAAAAATGCGTTTGAGCATTTTTAAAATAAAAATAAATATCAAAGAGCTTGATTTTTAATCAAGCGATAGCTTATT
AAAAAGCGGTTTTCTTGGGT

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MFNFFKKIVNKIKGEEAKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGESYYDKTRLK
TITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGKKLNIQVISAKEGSDPSSLAYNT
IESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEECFIEDLVDAVFVES

Sequences:

>Translated_293_residues
MFNFFKKIVNKIKGEEAKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGESYYDKTRLK
TITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGKKLNIQVISAKEGSDPSSLAYNT
IESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEECFIEDLVDAVFVES
>Mature_293_residues
MFNFFKKIVNKIKGEEAKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGESYYDKTRLK
TITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGKKLNIQVISAKEGSDPSSLAYNT
IESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEECFIEDLVDAVFVES

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=266, Percent_Identity=30.8270676691729, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI226371618, Length=266, Percent_Identity=30.4511278195489, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI23308697, Length=228, Percent_Identity=28.0701754385965, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI295424842, Length=228, Percent_Identity=28.0701754385965, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI1789874, Length=200, Percent_Identity=50, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1788963, Length=225, Percent_Identity=32.8888888888889, Blast_Score=121, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17539958, Length=199, Percent_Identity=30.6532663316583, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193206261, Length=221, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325345, Length=204, Percent_Identity=32.843137254902, Blast_Score=105, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6320498, Length=258, Percent_Identity=30.6201550387597, Blast_Score=88, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17647949, Length=207, Percent_Identity=32.3671497584541, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24641198, Length=226, Percent_Identity=28.3185840707965, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 32489; Mature: 32489

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFFKKIVNKIKGEEAKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQL
CCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
EVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHC
AGDTFRAAAVKQLQLWGKKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRL
CCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEE
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEECFIEDLVDAVFVES
CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNFFKKIVNKIKGEEAKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQL
CCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
EVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHC
AGDTFRAAAVKQLQLWGKKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRL
CCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEE
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEECFIEDLVDAVFVES
CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]