| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947193
Identifier: 109947193
GI number: 109947193
Start: 539236
End: 540135
Strand: Reverse
Name: 109947193
Synonym: Hac_0611
Alternate gene names: NA
Gene position: 540135-539236 (Counterclockwise)
Preceding gene: 109947194
Following gene: 109947186
Centisome position: 34.76
GC content: 37.11
Gene sequence:
>900_bases ATGGGTTTTCAAAATGAAAATAAGTTGGAAATTGGCACTAAAGTCAAAGCCACGATCAAAGATAAAGTGGTAGAGGCTAA AGTCATTGGCATTGGGTTTAATCGTGTAACTTTACAAAGCGAAAAAGGTCAAGTCGCTTCGTATGTTTTCAATAGCGATA AGTTCCTAAAATGGTTTAATAAAGTTCCCTTAAACGAGGCGCTAAAAATTCGTGCTGAAAACAAAAAAGAAAAAGCGGAC ATTTTAGATGGTATCAATATCGTTACTAGCGGACCGAGTGTGAAAGAAAGGACTTCCACTCCTAAAGAGTCTAAAGAGGA CAAGTATAAGCTCTCTTTTGGATTTAAAGATAAAAGTGAGTCTAGTTTTTCGGTGGTGGCTAAAGACTATTTCCTTACTG ATAGAAAAAGTAGGCTTGGTGCGTTACTAACCCCTATGTTTTATCAAGGAAAAGGACATCAAGCGTCTGCTATCATTCTT ACCGCTTTATCGTGTGCGGAGGGCTTAAATAAGCATAGCGACCTTGAGTGGGCTAAAATACTAGAAAATCGTAATGTTGA AAATTGCTATTACGACACTTTTGATAATATGAATTTAGGTAATCTTACCCTTTTCTGTAAGCTTATTTCTTTGTATGCGA GAGATCAAGAGGCGGAGATTGTGGAGTTGAAACCTGGCGGTATTTGGGATAATATGCTCCCTAGTAATAAAAATGAGGTG TTGTTTATAGCACAGCTCTTATGCGATAGAGGTATCAATAAGTATAATCTCTCATGTGGCGGTTTAACTAAAAATTTATT AAACGATTTCACGCCTTACATGGGGCTTATGGATAATGAGATGCTCGATGATTTTATCATGGAGGAAACTAAAGAAAACG AGACGGAGGGTGAAAACTAA
Upstream 100 bases:
>100_bases CAAAGGAGAAACAACGCCATGCTAAAAAAATAAATAACATTAAATAGGGTGATCGCAACCGATTGTTAAAGCAAATAAAA TTTTATTCAAGGAGTATTTT
Downstream 100 bases:
>100_bases CCGCCCCCCTACTCTTTGGGGGTCTCCTTTTTTAATCTCTTTTTTTTAATCTCTCTTAATTTTTCTTTTTTCAACTGCCC TCTAATCCGTCAATTTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MGFQNENKLEIGTKVKATIKDKVVEAKVIGIGFNRVTLQSEKGQVASYVFNSDKFLKWFNKVPLNEALKIRAENKKEKAD ILDGINIVTSGPSVKERTSTPKESKEDKYKLSFGFKDKSESSFSVVAKDYFLTDRKSRLGALLTPMFYQGKGHQASAIIL TALSCAEGLNKHSDLEWAKILENRNVENCYYDTFDNMNLGNLTLFCKLISLYARDQEAEIVELKPGGIWDNMLPSNKNEV LFIAQLLCDRGINKYNLSCGGLTKNLLNDFTPYMGLMDNEMLDDFIMEETKENETEGEN
Sequences:
>Translated_299_residues MGFQNENKLEIGTKVKATIKDKVVEAKVIGIGFNRVTLQSEKGQVASYVFNSDKFLKWFNKVPLNEALKIRAENKKEKAD ILDGINIVTSGPSVKERTSTPKESKEDKYKLSFGFKDKSESSFSVVAKDYFLTDRKSRLGALLTPMFYQGKGHQASAIIL TALSCAEGLNKHSDLEWAKILENRNVENCYYDTFDNMNLGNLTLFCKLISLYARDQEAEIVELKPGGIWDNMLPSNKNEV LFIAQLLCDRGINKYNLSCGGLTKNLLNDFTPYMGLMDNEMLDDFIMEETKENETEGEN >Mature_298_residues GFQNENKLEIGTKVKATIKDKVVEAKVIGIGFNRVTLQSEKGQVASYVFNSDKFLKWFNKVPLNEALKIRAENKKEKADI LDGINIVTSGPSVKERTSTPKESKEDKYKLSFGFKDKSESSFSVVAKDYFLTDRKSRLGALLTPMFYQGKGHQASAIILT ALSCAEGLNKHSDLEWAKILENRNVENCYYDTFDNMNLGNLTLFCKLISLYARDQEAEIVELKPGGIWDNMLPSNKNEVL FIAQLLCDRGINKYNLSCGGLTKNLLNDFTPYMGLMDNEMLDDFIMEETKENETEGEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33783; Mature: 33652
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFQNENKLEIGTKVKATIKDKVVEAKVIGIGFNRVTLQSEKGQVASYVFNSDKFLKWFN CCCCCCCCEEECCEEHHHHHHHHEEEEEEEECCCEEEEECCCCCEEEEEECCHHHHHHHH KVPLNEALKIRAENKKEKADILDGINIVTSGPSVKERTSTPKESKEDKYKLSFGFKDKSE CCCCCHHHEEECCCCHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCC SSFSVVAKDYFLTDRKSRLGALLTPMFYQGKGHQASAIILTALSCAEGLNKHSDLEWAKI CCEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LENRNVENCYYDTFDNMNLGNLTLFCKLISLYARDQEAEIVELKPGGIWDNMLPSNKNEV HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCE LFIAQLLCDRGINKYNLSCGGLTKNLLNDFTPYMGLMDNEMLDDFIMEETKENETEGEN EHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GFQNENKLEIGTKVKATIKDKVVEAKVIGIGFNRVTLQSEKGQVASYVFNSDKFLKWFN CCCCCCCEEECCEEHHHHHHHHEEEEEEEECCCEEEEECCCCCEEEEEECCHHHHHHHH KVPLNEALKIRAENKKEKADILDGINIVTSGPSVKERTSTPKESKEDKYKLSFGFKDKSE CCCCCHHHEEECCCCHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCC SSFSVVAKDYFLTDRKSRLGALLTPMFYQGKGHQASAIILTALSCAEGLNKHSDLEWAKI CCEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LENRNVENCYYDTFDNMNLGNLTLFCKLISLYARDQEAEIVELKPGGIWDNMLPSNKNEV HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCE LFIAQLLCDRGINKYNLSCGGLTKNLLNDFTPYMGLMDNEMLDDFIMEETKENETEGEN EHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA