| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is flgL [H]
Identifier: 109947146
GI number: 109947146
Start: 487312
End: 489795
Strand: Reverse
Name: flgL [H]
Synonym: Hac_0555
Alternate gene names: 109947146
Gene position: 489795-487312 (Counterclockwise)
Preceding gene: 109947186
Following gene: 109947132
Centisome position: 31.52
GC content: 38.61
Gene sequence:
>2484_bases ATGCGTGTTACCTTTGGCTCTAAATACAACCAAATGAATCACTATCAAAACGCTTTGCAAAATAAAATCAATGACGCTAA CACCCAGATCGCTTCAGGGCTAAAAATCCGTTATGGTTATCAAAACAGCGACATTAACAACCAAAATTTAAAATTCCAAT ACGAAGAAAACACCTTAAATCAAGGCATTGATGTGGCTCAAAACGCCTACACTGCAACGCTCAATACTGACAAAGCCTTA CAAGAATTTTCTAAAACGATGGAGACTTTTAAAACCAAACTCATCCAATCCGCTAACGATGTGCATTCAGAGACTTCTCG CACCGCTATTGCTAACGATTTAGAACGCTTAAGAGAGCATATGATAAATATCGCTAACACCTCCATAGGGGGGGAATTTT TATTTGGGGGCAGTAAGGTGGATAGACCCCCTATTGATAGCGAGGGGAAATACCATGGCAATGGCGAAGATCTAAACGCA CTAGTCAGCTCTGATAACCTTGTGCCTTATAATATCAGCGGGCAAGATTTGTTTTTAGGCATCGATAAAGACAAACACAA ACTCATTACCTCCAATATTAAATTACTCAACCAAAACAAGCTCCACCCCAATGTGATGGACGCTTTAGAGCATTCTTCAT TACCTGAAGAAGTCTTTATCAAGCCTAACGATACCTTGCGAGAACTCATTGGCGATAACGATAAAGACCCCACCAATGAC CCTAAAGAATTTTTTTATTTGCAAGGCATTAGACCTGATGGCTCTAGTTTTAAGGAAAAATTCGTGCTGGATAAAGCCTA TCAAAACCAAGAAAGTGCAACTAAAGTGAGCGATTTATTGGATAAGATTGGGCATGCTTATGGGAACACTTCGCAAAATA AAGTCGTGGATGTGAGTTTGAATAATTGGGGGCAGATTGAAATTAAAAACCTAACACCCGGCAGTGAAAATTTAGACTTC CACTTGATTTCTAGCGATGGGGATTTTGATGATTTAGACGCCTTGCGCTCTAGCGGAAAAAGGGTTACTGAATATGTCAA AAGCGCGTTTGTAACTGACAGGAGTTTGAGCCAAGTTAAGGCGACACAGAGCATGTATAATTCTCATGCACTTGAAATTC CTAGCGTGTTTGTCACCAAAGACAATGTTTTAGCCAACAAAAACACCAAATTGAGCGAGATTTTTGGCGATAAGGTAAAA ACCTTAAAAATCAATGCCAGCCGTTTGGATAATACTGGCGGTATCAAAATCCCAAACCTCCCTATTTATTTGGATATTCC TATCCTTTTAGATGTGAAAAACTCTACCATCAAAGATTTGAAAGATGCGATTAAAGATCGCTTTAATAACGAAGTGGATG TGGAGGTTGAAAGCAACGCCCGTTTAAGGATCATTGATAATGCACCTAACCAATCGCCCATTTCTTTTGCTTTAAGCACC CTAGATGACAAAGGGCTAGAAGTCGCTGGTATCCCCACGAATAATGCGAGCGAATACCAAAAAACTTATTTCAATAAAAA GGGGGCAAAATTAGAAAGTAATGTCGCTCAAATCGCTCAAAATGGCGTGGCTAATGGCTCTACTCCATTGAGTGAAGTGG CTAAGGGGAGTTTAGAAAAAAGCGTTTTTAACATGAAATTAAACGATGTTAATGGTTCGTTTTTAGAAGCGCAAATGATT TTGGATAATGGGGCTTTTTTAAGCCTTCCTAATGGCATTAAAATCCCACTCTATGACCCTACAACCGCTGATGTTCAAGT TTCTAAACCTAATGAAGTGACTTACAGGCAACTCATGGATGCAATGAGTATTGCACTCAATTATAGCAATATTGACCCTG CAATCTATCAGCAAATCAGCGATAACCCCTATTCAAAAGAAAGCAAGGAACAATTTATTGATTTGTTAAAACAAGCTAAA GGCAATCTTTCTGTTAATTTGAATGAAGATGGCAAAATGGTGATACAAGATAACATGCATTCAAACACGAAAATGCAGTT CATGCTTTTTGATAAAGACGCGAATGATTTTTCTCAAAACGCCTTGCACAGCGACAAACCAAGCCTTAAATTAAACGCCA ATAACGCCTTGATTATTGACAAGCCAAGCGTGAATTTTTTTGATCAATTAGAGGGTGTTATCACTTCTGTAAGAAAGGGG ATTTATCGCCCAGACGCTTTAGGGGATACTTATTCTAGCGATATGCGTAATTTAGGCATTCAAAATGGCATCACCCTTAT AGACCACTTGAGCGATCACATAGAAAAAATGATCGCCAAAAATGGCACTCATGGTAAGGCGTTTGAAAATATCATCAGGC GTAATGAAGTTTTAAAAACACAAGTTCAAAGCATTCGTGGGGAAACCACCGGCACGGATATGGCAGAAACTTATAATAAA TTTTCCAATCTCACCAACAATTATAACGCCGTTTTGGCTTCTACGAACAAAATCAATAATTTGTCTTTAACGAAATATTT GTAA
Upstream 100 bases:
>100_bases AACTTAAAAAACAAAAACATGTTGGTTAAAACCTCCAATCTCTTATTTTTGGAATACTTTTAGCTTGTTTGTCAGAAAAA CCAATAAGGATTGAACGATC
Downstream 100 bases:
>100_bases CCTTTTAGTGTGTTTAGCGTTCTAGTGAGAGATGTTAAAGAGAAATATTTTTAAGACTTTTAACCCCCTCCCTTATCCTT TATTTCGTGGGCAAATCGCC
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MRVTFGSKYNQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLNQGIDVAQNAYTATLNTDKAL QEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREHMINIANTSIGGEFLFGGSKVDRPPIDSEGKYHGNGEDLNA LVSSDNLVPYNISGQDLFLGIDKDKHKLITSNIKLLNQNKLHPNVMDALEHSSLPEEVFIKPNDTLRELIGDNDKDPTND PKEFFYLQGIRPDGSSFKEKFVLDKAYQNQESATKVSDLLDKIGHAYGNTSQNKVVDVSLNNWGQIEIKNLTPGSENLDF HLISSDGDFDDLDALRSSGKRVTEYVKSAFVTDRSLSQVKATQSMYNSHALEIPSVFVTKDNVLANKNTKLSEIFGDKVK TLKINASRLDNTGGIKIPNLPIYLDIPILLDVKNSTIKDLKDAIKDRFNNEVDVEVESNARLRIIDNAPNQSPISFALST LDDKGLEVAGIPTNNASEYQKTYFNKKGAKLESNVAQIAQNGVANGSTPLSEVAKGSLEKSVFNMKLNDVNGSFLEAQMI LDNGAFLSLPNGIKIPLYDPTTADVQVSKPNEVTYRQLMDAMSIALNYSNIDPAIYQQISDNPYSKESKEQFIDLLKQAK GNLSVNLNEDGKMVIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLEGVITSVRKG IYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYNK FSNLTNNYNAVLASTNKINNLSLTKYL
Sequences:
>Translated_827_residues MRVTFGSKYNQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLNQGIDVAQNAYTATLNTDKAL QEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREHMINIANTSIGGEFLFGGSKVDRPPIDSEGKYHGNGEDLNA LVSSDNLVPYNISGQDLFLGIDKDKHKLITSNIKLLNQNKLHPNVMDALEHSSLPEEVFIKPNDTLRELIGDNDKDPTND PKEFFYLQGIRPDGSSFKEKFVLDKAYQNQESATKVSDLLDKIGHAYGNTSQNKVVDVSLNNWGQIEIKNLTPGSENLDF HLISSDGDFDDLDALRSSGKRVTEYVKSAFVTDRSLSQVKATQSMYNSHALEIPSVFVTKDNVLANKNTKLSEIFGDKVK TLKINASRLDNTGGIKIPNLPIYLDIPILLDVKNSTIKDLKDAIKDRFNNEVDVEVESNARLRIIDNAPNQSPISFALST LDDKGLEVAGIPTNNASEYQKTYFNKKGAKLESNVAQIAQNGVANGSTPLSEVAKGSLEKSVFNMKLNDVNGSFLEAQMI LDNGAFLSLPNGIKIPLYDPTTADVQVSKPNEVTYRQLMDAMSIALNYSNIDPAIYQQISDNPYSKESKEQFIDLLKQAK GNLSVNLNEDGKMVIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLEGVITSVRKG IYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYNK FSNLTNNYNAVLASTNKINNLSLTKYL >Mature_827_residues MRVTFGSKYNQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLNQGIDVAQNAYTATLNTDKAL QEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREHMINIANTSIGGEFLFGGSKVDRPPIDSEGKYHGNGEDLNA LVSSDNLVPYNISGQDLFLGIDKDKHKLITSNIKLLNQNKLHPNVMDALEHSSLPEEVFIKPNDTLRELIGDNDKDPTND PKEFFYLQGIRPDGSSFKEKFVLDKAYQNQESATKVSDLLDKIGHAYGNTSQNKVVDVSLNNWGQIEIKNLTPGSENLDF HLISSDGDFDDLDALRSSGKRVTEYVKSAFVTDRSLSQVKATQSMYNSHALEIPSVFVTKDNVLANKNTKLSEIFGDKVK TLKINASRLDNTGGIKIPNLPIYLDIPILLDVKNSTIKDLKDAIKDRFNNEVDVEVESNARLRIIDNAPNQSPISFALST LDDKGLEVAGIPTNNASEYQKTYFNKKGAKLESNVAQIAQNGVANGSTPLSEVAKGSLEKSVFNMKLNDVNGSFLEAQMI LDNGAFLSLPNGIKIPLYDPTTADVQVSKPNEVTYRQLMDAMSIALNYSNIDPAIYQQISDNPYSKESKEQFIDLLKQAK GNLSVNLNEDGKMVIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLEGVITSVRKG IYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYNK FSNLTNNYNAVLASTNKINNLSLTKYL
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 92101; Mature: 92101
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTFGSKYNQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLN CEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCHH QGIDVAQNAYTATLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREH CCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MINIANTSIGGEFLFGGSKVDRPPIDSEGKYHGNGEDLNALVSSDNLVPYNISGQDLFLG HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHEECCCCEEEEECCCCEEEEE IDKDKHKLITSNIKLLNQNKLHPNVMDALEHSSLPEEVFIKPNDTLRELIGDNDKDPTND CCCCCHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCCCCC PKEFFYLQGIRPDGSSFKEKFVLDKAYQNQESATKVSDLLDKIGHAYGNTSQNKVVDVSL CCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE NNWGQIEIKNLTPGSENLDFHLISSDGDFDDLDALRSSGKRVTEYVKSAFVTDRSLSQVK CCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH ATQSMYNSHALEIPSVFVTKDNVLANKNTKLSEIFGDKVKTLKINASRLDNTGGIKIPNL HHHHHHHCCCEECCEEEEECCCEEECCCCHHHHHHCCCEEEEEEEHHHCCCCCCEECCCC PIYLDIPILLDVKNSTIKDLKDAIKDRFNNEVDVEVESNARLRIIDNAPNQSPISFALST CEEEECEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHH LDDKGLEVAGIPTNNASEYQKTYFNKKGAKLESNVAQIAQNGVANGSTPLSEVAKGSLEK CCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SVFNMKLNDVNGSFLEAQMILDNGAFLSLPNGIKIPLYDPTTADVQVSKPNEVTYRQLMD HHEEEEEECCCCCEEEEEEEECCCCEEECCCCCEEEEECCCCCCEEECCCCCHHHHHHHH AMSIALNYSNIDPAIYQQISDNPYSKESKEQFIDLLKQAKGNLSVNLNEDGKMVIQDNMH HHHHHEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCC SNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLEGVITSVRKG CCCEEEEEEEECCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHC IYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKT CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QVQSIRGETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL HHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC >Mature Secondary Structure MRVTFGSKYNQMNHYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLN CEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCHH QGIDVAQNAYTATLNTDKALQEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREH CCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MINIANTSIGGEFLFGGSKVDRPPIDSEGKYHGNGEDLNALVSSDNLVPYNISGQDLFLG HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHEECCCCEEEEECCCCEEEEE IDKDKHKLITSNIKLLNQNKLHPNVMDALEHSSLPEEVFIKPNDTLRELIGDNDKDPTND CCCCCHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCCCCC PKEFFYLQGIRPDGSSFKEKFVLDKAYQNQESATKVSDLLDKIGHAYGNTSQNKVVDVSL CCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE NNWGQIEIKNLTPGSENLDFHLISSDGDFDDLDALRSSGKRVTEYVKSAFVTDRSLSQVK CCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH ATQSMYNSHALEIPSVFVTKDNVLANKNTKLSEIFGDKVKTLKINASRLDNTGGIKIPNL HHHHHHHCCCEECCEEEEECCCEEECCCCHHHHHHCCCEEEEEEEHHHCCCCCCEECCCC PIYLDIPILLDVKNSTIKDLKDAIKDRFNNEVDVEVESNARLRIIDNAPNQSPISFALST CEEEECEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHH LDDKGLEVAGIPTNNASEYQKTYFNKKGAKLESNVAQIAQNGVANGSTPLSEVAKGSLEK CCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SVFNMKLNDVNGSFLEAQMILDNGAFLSLPNGIKIPLYDPTTADVQVSKPNEVTYRQLMD HHEEEEEECCCCCEEEEEEEECCCCEEECCCCCEEEEECCCCCCEEECCCCCHHHHHHHH AMSIALNYSNIDPAIYQQISDNPYSKESKEQFIDLLKQAKGNLSVNLNEDGKMVIQDNMH HHHHHEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCC SNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLEGVITSVRKG CCCEEEEEEEECCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHC IYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGTHGKAFENIIRRNEVLKT CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QVQSIRGETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL HHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]