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The map label for this gene is ureB [H]

Identifier: 109947049

GI number: 109947049

Start: 392063

End: 393772

Strand: Reverse

Name: ureB [H]

Synonym: Hac_0447

Alternate gene names: 109947049

Gene position: 393772-392063 (Counterclockwise)

Preceding gene: 109947050

Following gene: 109947047

Centisome position: 25.34

GC content: 44.27

Gene sequence:

>1710_bases
ATGAAAATGAAAAAACTTGATTATGTCAATACTTACGGACCCACTAAAGGGGATAAAGTAAGATTGGGCGATACAGAGCT
TTGGGCAGAAGTAGAGCATGATTATACCATCTATGGCGAAGAGTTGAAATTTGGTGCAGGCAAGACCATTAGAGAAGGCA
TGGGGCAAAGCAACAGCCATGATGAAAACACTTTGGATTTAGTGATCACCAACGCTCTTATTATTGACTATACCGGCATT
TATAAGGCTGATATTGGGATTAAAAACGGCAAGATTGCAGGCATTGGGAAAGCAGGCAATAAGGACATGCAAGATGGTGT
TAGCCCTAATTTAGTCGTAGGCGTGGGCACAGAAGCTTTAGCAGGAGAAGGCATGATAGTTACCGCTGGTGGGATTGATA
GCCACACGCATTTTTTAAGCCCTCAACAATTCCCCACAGCTCTAGCTAATGGCGTAACCACTATGTTTGGTGGCGGAACT
GGTCCGGTAGATGGCACGAATGCGACCACCATCACTCCAGGGGAATGGAATATCCACAGAATGTTAAGAGCCGCTGAAGA
ATACGCCATGAATGTGGGCTTTTTAGGGAAAGGGAATTCTTCAAGCAAAACCCAATTGGTGGAACAAATTGAAGCTGGGG
TTATAGGCTTTAAATTGCATGAGGATTGGGGCACGACTCCTAGCGCAATTAACACATGCTTAAGCGTCGCTGATGAATAC
GATGTGCAAGTGTGCATCCACACAGACACCGTGAATGAAGCTGGGTATGTGGAAAACACGCTCAATGCGATGAATGGGCG
TGCCATCCATGCATACCACATTGAAGGGGCAGGCGGAGGACATAGCCCAGATGTTATCACTATGGCCGGTGAAGAAAACA
TCCTACCCAGTTCCACCACCCCAACTATTCCTTATACCATAAATACGGTTGCAGAACACTTAGATATGCTAATGACCTGC
CACCATTTGGACAAAAAGATCCGAGAGGATTTACAATTTTCACAAAGCCGTATCCGCCCAGGCAGTATTGCAGCTGAAGA
TGTTTTGCATGACAATGGCATGATTGCTATGACAAGCTCTGACTCTCAAGCGATGGGAAGAGCAGGCGAAGTCGTTCCAA
GAACTTGGCAAACCGCTGATAAAAACAAGAAAGAGTTTGGTCCTTTAAAAGAAGACGCTCAAAATGGGAATGACAATTTC
CGCATCAAACGCTACATTTCTAAATACACCATTAACCCTGCTATTACGCATGGCGTGAGCGAATACATTGGCTCTGTGGA
AGCAGGAAAGATCGCTGATTTAGTCGTGTGGAATCCGGCCTTTTTTGGGGTGAAACCTAAAATCATCATTAAAGGCGGTT
TGGTCGTATTCTCTGAAATGGGCGATAGCAACGCATCTGTGCCAACCCCTCAACCTGTTTATTACAGAGAAATGTTTGGT
CATCATGGAAAGGCTAAATTTGACACGAGCATCACTTTTGTCAATAAGCTCGCTTATGAAAAGGGCATTAAAGAAAAGCT
TGGATTGGAAAGAAAGGTATTGCCCATCAAAAATGTGCGCAATATCACTAAAAAAGACTTTAAGTTCAACAACACCACAG
GAAAACTCACCGTTGACCCTAAAAGCTTTGAAGTCTTTTTGGAGGGCAAACTTTGCACTTCCAAGCCAGCGAGCGAATTG
CCTTTAGCGCAACGATACACTTTCTTTTAG

Upstream 100 bases:

>100_bases
GGCATGAATGGGCTTACAAACAATATCGCCAATGAACGCCACAAACCTTTTGCGATAGAAAACGCTAAAAAACATGGATT
TTTAAAATAAGGAGTTTGTT

Downstream 100 bases:

>100_bases
AAAAAACGCTTCCTTAAGGGATATTTTCCTTAAGGGAGTTTAAAAACTCTGCATCTTTTATTTTTGTCAAATAAGATCGG
TATGGAATATATAGTCAGGC

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta [H]

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKMKKLDYVNTYGPTKGDKVRLGDTELWAEVEHDYTIYGEELKFGAGKTIREGMGQSNSHDENTLDLVITNALIIDYTGI
YKADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEALAGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGT
GPVDGTNATTITPGEWNIHRMLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGVIGFKLHEDWGTTPSAINTCLSVADEY
DVQVCIHTDTVNEAGYVENTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTTPTIPYTINTVAEHLDMLMTC
HHLDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSSDSQAMGRAGEVVPRTWQTADKNKKEFGPLKEDAQNGNDNF
RIKRYISKYTINPAITHGVSEYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFG
HHGKAKFDTSITFVNKLAYEKGIKEKLGLERKVLPIKNVRNITKKDFKFNNTTGKLTVDPKSFEVFLEGKLCTSKPASEL
PLAQRYTFF

Sequences:

>Translated_569_residues
MKMKKLDYVNTYGPTKGDKVRLGDTELWAEVEHDYTIYGEELKFGAGKTIREGMGQSNSHDENTLDLVITNALIIDYTGI
YKADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEALAGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGT
GPVDGTNATTITPGEWNIHRMLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGVIGFKLHEDWGTTPSAINTCLSVADEY
DVQVCIHTDTVNEAGYVENTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTTPTIPYTINTVAEHLDMLMTC
HHLDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSSDSQAMGRAGEVVPRTWQTADKNKKEFGPLKEDAQNGNDNF
RIKRYISKYTINPAITHGVSEYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFG
HHGKAKFDTSITFVNKLAYEKGIKEKLGLERKVLPIKNVRNITKKDFKFNNTTGKLTVDPKSFEVFLEGKLCTSKPASEL
PLAQRYTFF
>Mature_569_residues
MKMKKLDYVNTYGPTKGDKVRLGDTELWAEVEHDYTIYGEELKFGAGKTIREGMGQSNSHDENTLDLVITNALIIDYTGI
YKADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEALAGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGT
GPVDGTNATTITPGEWNIHRMLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGVIGFKLHEDWGTTPSAINTCLSVADEY
DVQVCIHTDTVNEAGYVENTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTTPTIPYTINTVAEHLDMLMTC
HHLDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSSDSQAMGRAGEVVPRTWQTADKNKKEFGPLKEDAQNGNDNF
RIKRYISKYTINPAITHGVSEYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFG
HHGKAKFDTSITFVNKLAYEKGIKEKLGLERKVLPIKNVRNITKKDFKFNNTTGKLTVDPKSFEVFLEGKLCTSKPASEL
PLAQRYTFF

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG0804

COG function: function code E; Urea amidohydrolase (urease) alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 urease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR011612
- InterPro:   IPR005848
- InterPro:   IPR017951
- InterPro:   IPR017950 [H]

Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]

EC number: =3.5.1.5 [H]

Molecular weight: Translated: 61937; Mature: 61937

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKKLDYVNTYGPTKGDKVRLGDTELWAEVEHDYTIYGEELKFGAGKTIREGMGQSNSH
CCCCCCCCCCCCCCCCCCEEEECCHHHEEEECCCEEEECCEEECCCCCHHHHHCCCCCCC
DENTLDLVITNALIIDYTGIYKADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEAL
CCCEEEEEEEEEEEEEECCEEEECCCCCCCEEEEECCCCCCHHHCCCCCCEEEEECCHHH
AGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGTGPVDGTNATTITPGEWNIHR
CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEECCCCCHHHH
MLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGVIGFKLHEDWGTTPSAINTCLSVADEY
HHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCC
DVQVCIHTDTVNEAGYVENTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTT
CEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCC
PTIPYTINTVAEHLDMLMTCHHLDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECC
DSQAMGRAGEVVPRTWQTADKNKKEFGPLKEDAQNGNDNFRIKRYISKYTINPAITHGVS
CHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHH
EYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFG
HHHCCCCCCCEEEEEEECCHHCCCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHC
HHGKAKFDTSITFVNKLAYEKGIKEKLGLERKVLPIKNVRNITKKDFKFNNTTGKLTVDP
CCCCCEECCHHHHHHHHHHHHCCHHHHCCCEEECCHHHHHHHHHHCCEECCCCCEEEECC
KSFEVFLEGKLCTSKPASELPLAQRYTFF
CCEEEEEECCCCCCCCHHHCCCCHHCCCC
>Mature Secondary Structure
MKMKKLDYVNTYGPTKGDKVRLGDTELWAEVEHDYTIYGEELKFGAGKTIREGMGQSNSH
CCCCCCCCCCCCCCCCCCEEEECCHHHEEEECCCEEEECCEEECCCCCHHHHHCCCCCCC
DENTLDLVITNALIIDYTGIYKADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEAL
CCCEEEEEEEEEEEEEECCEEEECCCCCCCEEEEECCCCCCHHHCCCCCCEEEEECCHHH
AGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGTGPVDGTNATTITPGEWNIHR
CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEECCCCCHHHH
MLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGVIGFKLHEDWGTTPSAINTCLSVADEY
HHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCC
DVQVCIHTDTVNEAGYVENTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTT
CEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCC
PTIPYTINTVAEHLDMLMTCHHLDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECC
DSQAMGRAGEVVPRTWQTADKNKKEFGPLKEDAQNGNDNFRIKRYISKYTINPAITHGVS
CHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCEEEEEEHHHHCCCHHHHHHHH
EYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFG
HHHCCCCCCCEEEEEEECCHHCCCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHC
HHGKAKFDTSITFVNKLAYEKGIKEKLGLERKVLPIKNVRNITKKDFKFNNTTGKLTVDP
CCCCCEECCHHHHHHHHHHHHCCHHHHCCCEEECCHHHHHHHHHHCCEECCCCCEEEECC
KSFEVFLEGKLCTSKPASELPLAQRYTFF
CCEEEEEECCCCCCCCHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA