Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947048

Identifier: 109947048

GI number: 109947048

Start: 390884

End: 391996

Strand: Direct

Name: 109947048

Synonym: Hac_0446

Alternate gene names: NA

Gene position: 390884-391996 (Clockwise)

Preceding gene: 109947046

Following gene: 109947064

Centisome position: 25.15

GC content: 42.23

Gene sequence:

>1113_bases
TTGCAAGAAAGGAACGGACAAGTTGCAGGTGTAGCGTATAGGGAGGATTTAGGAGGGATTGATTTGGTGTGGGGGAATAA
AAAGACTAAAGACAGCAACGGATATGGTTTAGCTCATATATCAGAAAAGAGAGAAAAACAATACAAAAGGTTAGGATTGA
CACCAGAACAAGCCAAAGAAAGGACTAATGAATTATTAAAACAAATACCAGAAGTGATAGAGAAAGGTATTAAAGATGAT
GATTATATTGGGCATGCGACCATAAGATATAATGATATTGAAGTGGGTTTAAGTAGTCAAAAAGGAAATACGCCTTTAAA
AAATCATCATATGATTACAAGTTTTGAAAGAGATGAAAAGGTTTTAAGGGAGTCAGAGACCATTGCGACACTCTCTAACG
ATTACAGAGATGGCATCAACTATAGCATCTCAAGCCTTGAACCCCATCCTAGCGCAAACGCGCTTAAAACGCAAGAGTCT
TTATTAAAAAAACCAGAAAACCCTAACGAATTGACACCAGAAACTCCAAATTTATCCCCCCACAAACAAGCTAACGCCGA
AAAGCTTGCGAAGTTAGAACGAGAAGCACAAGAAAGCGAACAGGAATTTTTAAAAGCCAAAGAACAAGAAGCTAAAAGGA
AAGAAGCCTTAAAACGCAAATTAGAACACGAGCGCGGCAACGCCGGTAACCTTGAAAGCCAGACTAAGATAGAAGTGGGA
GAGGATATCCCCACACAGATTTTAGCGAGCATCCCTAAGAGTCGGGTGCGCTTGAACGAAAGAGAGATTTACGACTTAGA
CTACGCGATCGTGAATGCAAAAGATCTAAAGCCCAGTTTCACTACAGGAGGCACGCAAAAGCGCACCGCCATGAACGAAG
AACAGATCCAAAGCATCGCGCGGAATTTTGACCCTAAAAAGATATTCGGGAGCGGAGGGTTTGAAGACTTGCCCATCATC
TTGCATGACGGGCAGGTGATCGCGCCCAACCACTGGGTAGAAGGCATGCTCAACTTCACGCCTAAAAGCCGATACGCTTA
CGATAAAGCGATCAAAGAATACTACCGCGTCCACCTGAAGCCTGACTATATATTCCATACCGATCTTATTTGA

Upstream 100 bases:

>100_bases
ATTAGCTTGTTTTGTAAGGGTTTCTAATGTTTTTTGCTACATTCTAAGACTTGATTACTCCGAGTTTGCTTTAAGACCTA
AGGAAGCGCTAGAGAAGCTC

Downstream 100 bases:

>100_bases
CAAAAATAAAAGATGCAGAGTTTTTAAACTCCCTTAAGGAAAATATCCCTTAAGGAAGCGTTTTTTCTAAAAGAAAGTGT
ATCGTTGCGCTAAAGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MQERNGQVAGVAYREDLGGIDLVWGNKKTKDSNGYGLAHISEKREKQYKRLGLTPEQAKERTNELLKQIPEVIEKGIKDD
DYIGHATIRYNDIEVGLSSQKGNTPLKNHHMITSFERDEKVLRESETIATLSNDYRDGINYSISSLEPHPSANALKTQES
LLKKPENPNELTPETPNLSPHKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVG
EDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIARNFDPKKIFGSGGFEDLPII
LHDGQVIAPNHWVEGMLNFTPKSRYAYDKAIKEYYRVHLKPDYIFHTDLI

Sequences:

>Translated_370_residues
MQERNGQVAGVAYREDLGGIDLVWGNKKTKDSNGYGLAHISEKREKQYKRLGLTPEQAKERTNELLKQIPEVIEKGIKDD
DYIGHATIRYNDIEVGLSSQKGNTPLKNHHMITSFERDEKVLRESETIATLSNDYRDGINYSISSLEPHPSANALKTQES
LLKKPENPNELTPETPNLSPHKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVG
EDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIARNFDPKKIFGSGGFEDLPII
LHDGQVIAPNHWVEGMLNFTPKSRYAYDKAIKEYYRVHLKPDYIFHTDLI
>Mature_370_residues
MQERNGQVAGVAYREDLGGIDLVWGNKKTKDSNGYGLAHISEKREKQYKRLGLTPEQAKERTNELLKQIPEVIEKGIKDD
DYIGHATIRYNDIEVGLSSQKGNTPLKNHHMITSFERDEKVLRESETIATLSNDYRDGINYSISSLEPHPSANALKTQES
LLKKPENPNELTPETPNLSPHKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVG
EDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIARNFDPKKIFGSGGFEDLPII
LHDGQVIAPNHWVEGMLNFTPKSRYAYDKAIKEYYRVHLKPDYIFHTDLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42161; Mature: 42161

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERNGQVAGVAYREDLGGIDLVWGNKKTKDSNGYGLAHISEKREKQYKRLGLTPEQAKE
CCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHH
RTNELLKQIPEVIEKGIKDDDYIGHATIRYNDIEVGLSSQKGNTPLKNHHMITSFERDEK
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEECCHHHHH
VLRESETIATLSNDYRDGINYSISSLEPHPSANALKTQESLLKKPENPNELTPETPNLSP
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
HKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
EDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIA
CCCHHHHHHHCCHHHHCCCCCCEEECCEEEEEHHHCCCCCCCCCCHHHHHCCHHHHHHHH
RNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYDKAIKEYYRVHLK
HCCCCCEEECCCCCCCCCEEEECCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHEECC
PDYIFHTDLI
CCEEEECCCC
>Mature Secondary Structure
MQERNGQVAGVAYREDLGGIDLVWGNKKTKDSNGYGLAHISEKREKQYKRLGLTPEQAKE
CCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHH
RTNELLKQIPEVIEKGIKDDDYIGHATIRYNDIEVGLSSQKGNTPLKNHHMITSFERDEK
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEECCHHHHH
VLRESETIATLSNDYRDGINYSISSLEPHPSANALKTQESLLKKPENPNELTPETPNLSP
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
HKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
EDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIA
CCCHHHHHHHCCHHHHCCCCCCEEECCEEEEEHHHCCCCCCCCCCHHHHHCCHHHHHHHH
RNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYDKAIKEYYRVHLK
HCCCCCEEECCCCCCCCCEEEECCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHEECC
PDYIFHTDLI
CCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA