| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947038
Identifier: 109947038
GI number: 109947038
Start: 378514
End: 379824
Strand: Reverse
Name: 109947038
Synonym: Hac_0435
Alternate gene names: NA
Gene position: 379824-378514 (Counterclockwise)
Preceding gene: 109947040
Following gene: 109947036
Centisome position: 24.44
GC content: 37.76
Gene sequence:
>1311_bases TTGATTTTCTTGAAAAAATCTCTTTGTGCGTTGTTGTTTTCAAGTTTTTTAATAGCACCTTTAATGAAAGCGGCTAGTTT TGTCTATGACTTGAAGTTTATGAGCTTTAATTACAATTTACTTTCCCCTCCAAATAACCCTTATTGGAATAGCCTAACCA ACATGAAAGTGCGTCTCATACCTCAAATTGGCGTCCAATTAGACAAAAGACAAGCCTTAATGCTTGGAGCGTGGTTCATT CAAAATTTACACACGCATTATAGCTATTTCCCCTATTCGTGGGGGGTTACGATGTATTATCAATACATAGGGAAAAATTT GAGATTTTTTTTAGGGATTGTGCCACGAAGCTATCAAATAGGGCATTACCCTTTGAGCGCTTTTAAAAAACTTTTTTGGT TTATCGATCCTACTTTTAGGGGAGGGGCGTTCCAATTCAAACCGGCTTATGATCCTAATCGTTGGTGGAATGGGTGGTTT GAGAGCGTTGTTGATTGGTATGGGGGGCGTAATTGGAATAATCAGCCCAAAAAGAAAAATTACGACTTCAGCCAATTTTT GTATTTTGTTTCTTCAGAATTTCAATTTCTTAAAGGGTATTTAGGTTTAGGGGGACAACTTGTGATCTTTCATAACGCCA GCTCTCATAGCATGGGAGATAACTACCCTTATGGTGGGAATTCCTACTTTAAACCAGGCGATGCAACCCCACAATGGCCT AATGGCTACCCTTATTTCAGTCAAAAAGATAATCCACAAGGTGGCGAAATAGGAAAATACTCTAACCCTACCATTTTGGA TAGGATTTATTACCATGCTTATCTTAAAGCGGATTTTAAAAACCTCATGCCTTATATGGATAATATCTTTATGACCTTTG GCACGCAATCGTCTCAAACTCATTATTGCGTACGTTATGCTAGTGAGTGTAAAAACGCTCAATTTTATAACAGCTTTGGG GGAGAATTTTACGCCCAAGTGCAATACAAAGGCTTTGGGATTTTTAACAGGTATTATTTTTCCAACAAACCCCAAATGCA CTTTTATGCCACTTATGGCCAATCCCTTTATACTGGGTTGCCATGGTATAGAGCCCCTAATTTTGATATGATAGGTCTTT ATTATGTTTATAAAAATAAATGGGTGAGCGTGCGAGCGGATGCGTTTTTTAACTTTTTAGGTGGGGGCGATGGGTATCAT TTGTATGGCAAAGGGGGTAAGTGGATCACCACTTATCAGCAATTTTTAACCCTATCCATAGACACACAAGAGCTAATTGA TTTTGTCAAATCTAAAATTCCTAATAAGTAA
Upstream 100 bases:
>100_bases CCATTTTATATATCTTAATGGCAAACAATCTAAAAATATCCCTTGCATTTTATCTTTAATGCTACAATTTTAAAAGATGA TGAAAGGGGCTGTGTTTAAT
Downstream 100 bases:
>100_bases CTTTAAAAATTATAAATATAATTCACATAAGCGACCGGCAAGCGGTGCCATAAAGTGGTCGCGCTCAAGCCATCAATAAT CTCCGTTTTTTTGTTAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MIFLKKSLCALLFSSFLIAPLMKAASFVYDLKFMSFNYNLLSPPNNPYWNSLTNMKVRLIPQIGVQLDKRQALMLGAWFI QNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWF ESVVDWYGGRNWNNQPKKKNYDFSQFLYFVSSEFQFLKGYLGLGGQLVIFHNASSHSMGDNYPYGGNSYFKPGDATPQWP NGYPYFSQKDNPQGGEIGKYSNPTILDRIYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNAQFYNSFG GEFYAQVQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYVYKNKWVSVRADAFFNFLGGGDGYH LYGKGGKWITTYQQFLTLSIDTQELIDFVKSKIPNK
Sequences:
>Translated_436_residues MIFLKKSLCALLFSSFLIAPLMKAASFVYDLKFMSFNYNLLSPPNNPYWNSLTNMKVRLIPQIGVQLDKRQALMLGAWFI QNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWF ESVVDWYGGRNWNNQPKKKNYDFSQFLYFVSSEFQFLKGYLGLGGQLVIFHNASSHSMGDNYPYGGNSYFKPGDATPQWP NGYPYFSQKDNPQGGEIGKYSNPTILDRIYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNAQFYNSFG GEFYAQVQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYVYKNKWVSVRADAFFNFLGGGDGYH LYGKGGKWITTYQQFLTLSIDTQELIDFVKSKIPNK >Mature_436_residues MIFLKKSLCALLFSSFLIAPLMKAASFVYDLKFMSFNYNLLSPPNNPYWNSLTNMKVRLIPQIGVQLDKRQALMLGAWFI QNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWF ESVVDWYGGRNWNNQPKKKNYDFSQFLYFVSSEFQFLKGYLGLGGQLVIFHNASSHSMGDNYPYGGNSYFKPGDATPQWP NGYPYFSQKDNPQGGEIGKYSNPTILDRIYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNAQFYNSFG GEFYAQVQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYVYKNKWVSVRADAFFNFLGGGDGYH LYGKGGKWITTYQQFLTLSIDTQELIDFVKSKIPNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51189; Mature: 51189
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFLKKSLCALLFSSFLIAPLMKAASFVYDLKFMSFNYNLLSPPNNPYWNSLTNMKVRLI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCCCCCCCCCEEEEE PQIGVQLDKRQALMLGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQI ECCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCEEC GHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFESVVDWYGGRNWNNQPKKKN CCCCHHHHHHHHHEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC YDFSQFLYFVSSEFQFLKGYLGLGGQLVIFHNASSHSMGDNYPYGGNSYFKPGDATPQWP CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC NGYPYFSQKDNPQGGEIGKYSNPTILDRIYYHAYLKADFKNLMPYMDNIFMTFGTQSSQT CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCC HYCVRYASECKNAQFYNSFGGEFYAQVQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGL HHHHHHHHHHCCCHHHHCCCCEEEEEEEEECEEEEEEEEECCCCCEEEEEECCCHHHCCC PWYRAPNFDMIGLYYVYKNKWVSVRADAFFNFLGGGDGYHLYGKGGKWITTYQQFLTLSI CCCCCCCCCEEEEEEEEECCEEEEEHHHHHHHCCCCCCEEEEECCCCCCEEEHHHEEEEC DTQELIDFVKSKIPNK CHHHHHHHHHHHCCCC >Mature Secondary Structure MIFLKKSLCALLFSSFLIAPLMKAASFVYDLKFMSFNYNLLSPPNNPYWNSLTNMKVRLI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCCCCCCCCCEEEEE PQIGVQLDKRQALMLGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQI ECCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCEEC GHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFESVVDWYGGRNWNNQPKKKN CCCCHHHHHHHHHEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC YDFSQFLYFVSSEFQFLKGYLGLGGQLVIFHNASSHSMGDNYPYGGNSYFKPGDATPQWP CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC NGYPYFSQKDNPQGGEIGKYSNPTILDRIYYHAYLKADFKNLMPYMDNIFMTFGTQSSQT CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCC HYCVRYASECKNAQFYNSFGGEFYAQVQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGL HHHHHHHHHHCCCHHHHCCCCEEEEEEEEECEEEEEEEEECCCCCEEEEEECCCHHHCCC PWYRAPNFDMIGLYYVYKNKWVSVRADAFFNFLGGGDGYHLYGKGGKWITTYQQFLTLSI CCCCCCCCCEEEEEEEEECCEEEEEHHHHHHHCCCCCCEEEEECCCCCCEEEHHHEEEEC DTQELIDFVKSKIPNK CHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA