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The map label for this gene is recA

Identifier: 109946946

GI number: 109946946

Start: 284618

End: 285661

Strand: Direct

Name: recA

Synonym: Hac_0336

Alternate gene names: 109946946

Gene position: 284618-285661 (Clockwise)

Preceding gene: 109946944

Following gene: 109946947

Centisome position: 18.32

GC content: 42.72

Gene sequence:

>1044_bases
ATGGCGATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAGGTAGAAAAGATTGACTCTATTTCTACGGGCTCGTTAGGGTTGGATTTGGCTTTAGGGA
TTGGGGGCGTTCCTAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGTAAGACTACTTTAAGCTTGCACATT
ATTGCAGAATGCCAAAAAAATGGAGGCGTGTGTGCATTTATTGACGCTGAGCATGCCCTAGATGTGCATTATGCAAAAAG
GCTGGGCGTGGATACGGAAAATTTACTCGTTTCCCAACCAGATACCGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTAGATTCTGTGGCGGCTCTTACGCCTAAAGCTGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGACTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTTTTGCACAAGATGAA
CACCACTCTCATTTTTATCAATCAAATAAGAATGAAAATCGGCATGATGGGTTATGGGAGCCCAGAGACCACAACCGGAG
GTAATGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATC
GGCAACAGGGCTAAAGTCAAAGTGGTTAAAAATAAAGTCGCTCCGCCTTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCAGAGAAAACGCTAAAGCTTTATTGAAAGAAGATAAAGCCCTAGCGAATGAA
ATCATTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCTTTACCGGATGAGCCCTTAGAAGAAATGGA
ATAA

Upstream 100 bases:

>100_bases
AAAGCAAATTCCTTTTATGGTAGGGTAAGCCCTTTTATTATAATAGATTTTAGGCTAGGATTTGATAGAATAAACGAATC
AAATTCAATAAGGTGGTTTA

Downstream 100 bases:

>100_bases
AAGGATCTTGATGCTAACGATTAAAGATATTCATGCTTTAGAAGTGATGGATAGTAGGGGTAATCCCACCATTCAAGCCA
GCGTGATTTTAAGCGATAAC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKVKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
IILKIKESIGSNEEIMPLPDEPLEEME

Sequences:

>Translated_347_residues
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKVKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
IILKIKESIGSNEEIMPLPDEPLEEME
>Mature_346_residues
AIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHII
AECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMG
DQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHIG
NRAKVKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANEI
ILKIKESIGSNEEIMPLPDEPLEEME

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=337, Percent_Identity=62.0178041543027, Blast_Score=438, Evalue=1e-124,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_HELAH (Q17YV1)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664174.1
- ProteinModelPortal:   Q17YV1
- SMR:   Q17YV1
- STRING:   Q17YV1
- GeneID:   4177068
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_0336
- NMPDR:   fig|382638.8.peg.325
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   Q17YV1
- ProtClustDB:   PRK09354
- BioCyc:   HACI382638:HAC_0336-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37710; Mature: 37579

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKG
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCC
RIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQP
CEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCHHHEEEECC
DTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKIT
CCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
HHHHHHCCEEEEEEEHHHHHEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCHHHC
GNRAKVKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKL
CCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEECCCCEEEECCHHH
GQGRENAKALLKEDKALANEIILKIKESIGSNEEIMPLPDEPLEEME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHCC
>Mature Secondary Structure 
AIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKG
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCC
RIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQP
CEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCHHHEEEECC
DTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKIT
CCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
HHHHHHCCEEEEEEEHHHHHEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCHHHC
GNRAKVKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKL
CCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEEECCCCEEEECCHHH
GQGRENAKALLKEDKALANEIILKIKESIGSNEEIMPLPDEPLEEME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA