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The map label for this gene is ygiC [H]

Identifier: 109946923

GI number: 109946923

Start: 263136

End: 264308

Strand: Direct

Name: ygiC [H]

Synonym: Hac_0310

Alternate gene names: 109946923

Gene position: 263136-264308 (Clockwise)

Preceding gene: 109946922

Following gene: 109946924

Centisome position: 16.93

GC content: 38.87

Gene sequence:

>1173_bases
ATGCAAGTAATTCCTTTAAAACCTTTAGACAATAAGACTTTGGAAGAAATCGGTTTGGATTGGCACACTGATAGAGATAA
CTCTTCTTATGTTGCTGATGAAATGGTGGTAGTTTCTCAAAAAGAAGCGGACGCCTATTATGACGCTTGCAATGAGCTTT
ATGACATGTTCGTAGAGACGGCTGAAGAGGTAATAGAAAACGAGCGCTTTTTTGAATTGGATATTCCTAATGCGCTCATT
CCTATGATCAAACAGAGTTTTGAAGAAGAAGTGCATTGGCATATTTATGGGCGTTTTGATTTGGCTGGGGGGCTTGATGG
TAAGCCCATTAAATTGCTAGAATTTAACGCAGATACCCCCACCATGCTCTATGAAACTGCAGTGATCCAATGGGCGTTAC
TCAAAGCGAATGGCTATGATGAAAATAAGCAATTCAATAACCTCTATGAAGCGCTTGGCGAGAATTTCAAACGCATGGTA
ACTTTGGGCGAAGACACGAGCCATTTTGAAGAAATGTATGAGGGGTGGAAAATCCTTTTTTCAAGCGTTAGGGATAATAT
TGAAGAAGAACGCACCATGCGTTTTTTACAAGACGCCGCTCAAAGCGTAGGGTTTGAAACGGATTTTTCTTACATTGATG
AGGTGGAGTTTAATGCAGAAGAGGGCGTGTTTAAAAACGGCTTGAATTATGAATTTCTATTCAAATTAATCCCATGGGAA
AATATCGCTATTGATGAGCCAGAATTGGCCCTTTTAATGCAAAGCATGATGGAAAATAGAAACACGATTTTTTTAAACCC
TGCTTATACGATCCTTTTCCAATCCAAGCGTTTTTTAAAACTTTTATGGGATAGATACCCCAACCACCCCTTATTGTTAG
AAACGAGCTATGAACCTTTAGCCAATAAAAAGCAAATCAAAAAAGTGGCTTTTGGTAGGGAAGGGGCCAATAGTGAAATT
TTTGAAGCTTCCATGCAATCGCTCTTAAAAACGGACGGCGTTTATTCTAACCACAAGCCCATTTATCAAGAGTTTTATGA
ACTCAATTCGCATAATGGCTTGTATTACCAGCCCAATGTGTTTTTTGCTTATGAATCTTGCGCATTAGGGTTTAGAAAAG
GGGGGTTGATTTTGGATAATTTTTCTAAATTTGTGAGCCACAGGTTGCAATAA

Upstream 100 bases:

>100_bases
ATAGGGGAAAAAGCGGTTTTTTTGGCTCTAGCAAGCCTACAAGTTCGCCGGCGGTAAGCTCTGGGACAAGGGGCTTTAAC
TCATAATTCAAGGCTAAAAG

Downstream 100 bases:

>100_bases
TGGCTAAAATGATGCGCTATTTCCACATTTATGCGACCACTTTTTTCTTCCCCTTAGTGTTGCTTTTTGCAATGAGTGGG
CTTTTATTGCTCTTTGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MQVIPLKPLDNKTLEEIGLDWHTDRDNSSYVADEMVVVSQKEADAYYDACNELYDMFVETAEEVIENERFFELDIPNALI
PMIKQSFEEEVHWHIYGRFDLAGGLDGKPIKLLEFNADTPTMLYETAVIQWALLKANGYDENKQFNNLYEALGENFKRMV
TLGEDTSHFEEMYEGWKILFSSVRDNIEEERTMRFLQDAAQSVGFETDFSYIDEVEFNAEEGVFKNGLNYEFLFKLIPWE
NIAIDEPELALLMQSMMENRNTIFLNPAYTILFQSKRFLKLLWDRYPNHPLLLETSYEPLANKKQIKKVAFGREGANSEI
FEASMQSLLKTDGVYSNHKPIYQEFYELNSHNGLYYQPNVFFAYESCALGFRKGGLILDNFSKFVSHRLQ

Sequences:

>Translated_390_residues
MQVIPLKPLDNKTLEEIGLDWHTDRDNSSYVADEMVVVSQKEADAYYDACNELYDMFVETAEEVIENERFFELDIPNALI
PMIKQSFEEEVHWHIYGRFDLAGGLDGKPIKLLEFNADTPTMLYETAVIQWALLKANGYDENKQFNNLYEALGENFKRMV
TLGEDTSHFEEMYEGWKILFSSVRDNIEEERTMRFLQDAAQSVGFETDFSYIDEVEFNAEEGVFKNGLNYEFLFKLIPWE
NIAIDEPELALLMQSMMENRNTIFLNPAYTILFQSKRFLKLLWDRYPNHPLLLETSYEPLANKKQIKKVAFGREGANSEI
FEASMQSLLKTDGVYSNHKPIYQEFYELNSHNGLYYQPNVFFAYESCALGFRKGGLILDNFSKFVSHRLQ
>Mature_390_residues
MQVIPLKPLDNKTLEEIGLDWHTDRDNSSYVADEMVVVSQKEADAYYDACNELYDMFVETAEEVIENERFFELDIPNALI
PMIKQSFEEEVHWHIYGRFDLAGGLDGKPIKLLEFNADTPTMLYETAVIQWALLKANGYDENKQFNNLYEALGENFKRMV
TLGEDTSHFEEMYEGWKILFSSVRDNIEEERTMRFLQDAAQSVGFETDFSYIDEVEFNAEEGVFKNGLNYEFLFKLIPWE
NIAIDEPELALLMQSMMENRNTIFLNPAYTILFQSKRFLKLLWDRYPNHPLLLETSYEPLANKKQIKKVAFGREGANSEI
FEASMQSLLKTDGVYSNHKPIYQEFYELNSHNGLYYQPNVFFAYESCALGFRKGGLILDNFSKFVSHRLQ

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=396, Percent_Identity=29.7979797979798, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1790629, Length=351, Percent_Identity=29.0598290598291, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789361, Length=360, Percent_Identity=25, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 45556; Mature: 45556

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVIPLKPLDNKTLEEIGLDWHTDRDNSSYVADEMVVVSQKEADAYYDACNELYDMFVET
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHEEEEECHHHHHHHHHHHHHHHHHHHH
AEEVIENERFFELDIPNALIPMIKQSFEEEVHWHIYGRFDLAGGLDGKPIKLLEFNADTP
HHHHHCCCCEEEECCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCEEEEEECCCCC
TMLYETAVIQWALLKANGYDENKQFNNLYEALGENFKRMVTLGEDTSHFEEMYEGWKILF
HHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHH
SSVRDNIEEERTMRFLQDAAQSVGFETDFSYIDEVEFNAEEGVFKNGLNYEFLFKLIPWE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHCCCCCEEEEEECCCC
NIAIDEPELALLMQSMMENRNTIFLNPAYTILFQSKRFLKLLWDRYPNHPLLLETSYEPL
CCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCC
ANKKQIKKVAFGREGANSEIFEASMQSLLKTDGVYSNHKPIYQEFYELNSHNGLYYQPNV
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCE
FFAYESCALGFRKGGLILDNFSKFVSHRLQ
EEEEHHHHHHHCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MQVIPLKPLDNKTLEEIGLDWHTDRDNSSYVADEMVVVSQKEADAYYDACNELYDMFVET
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHEEEEECHHHHHHHHHHHHHHHHHHHH
AEEVIENERFFELDIPNALIPMIKQSFEEEVHWHIYGRFDLAGGLDGKPIKLLEFNADTP
HHHHHCCCCEEEECCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCEEEEEECCCCC
TMLYETAVIQWALLKANGYDENKQFNNLYEALGENFKRMVTLGEDTSHFEEMYEGWKILF
HHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHH
SSVRDNIEEERTMRFLQDAAQSVGFETDFSYIDEVEFNAEEGVFKNGLNYEFLFKLIPWE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHCCCCCEEEEEECCCC
NIAIDEPELALLMQSMMENRNTIFLNPAYTILFQSKRFLKLLWDRYPNHPLLLETSYEPL
CCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCC
ANKKQIKKVAFGREGANSEIFEASMQSLLKTDGVYSNHKPIYQEFYELNSHNGLYYQPNV
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCE
FFAYESCALGFRKGGLILDNFSKFVSHRLQ
EEEEHHHHHHHCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]