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The map label for this gene is exbB [H]

Identifier: 109946885

GI number: 109946885

Start: 221739

End: 222179

Strand: Direct

Name: exbB [H]

Synonym: Hac_0269

Alternate gene names: 109946885

Gene position: 221739-222179 (Clockwise)

Preceding gene: 109946882

Following gene: 109946886

Centisome position: 14.27

GC content: 40.36

Gene sequence:

>441_bases
ATGGGAGCTGGTTTCTCCACTGAATTGTTGAAAGAGTATGTGGATACTTTCGTGTTTGTTGCACTCGGCATTGCGAGTTT
TTTAGCCTTATGGTTTGTGATTGAAAGGATTATTTTTTATTCCAAAGTCAATTTGAAAGCTTACACAGATGTGGACGCCT
TGAATTTGGATTTGACTAAGAATTTAACCATTCTTTATGTGATTTATTCTAATGCACCTTATGTGGGTTTACTGGGAACG
GTGCTAGGGGTCATGGTCACTTTCTATGACATGGGTATTAGTGAGGGGATGGACGCTAAAACGATCATGGTAGGTTTGTC
TTTAGCTTTAAAAGCGACCGCTCTAGGGCTTGCAGTGGCGATCCCCACACTCATTGCATATAACGGTTTGTTGAGAAAAT
CCGATGTGTTGAGCGAAAAATTCAGGATTATGTCCAAATGA

Upstream 100 bases:

>100_bases
TTCCTTTATCATTTTTGAAGCGTTTATGCGAAAAGTGAGTTTTATTGCAGCGTTACTTTGAAGTGTGTAGGGGAGTGCTT
ATTATTTAAAAGGAGTTTTT

Downstream 100 bases:

>100_bases
AAAGCATCAGAAGAGGCGATGGGCTCAATATTGTCCCTTTCATTGATGTGATTCTCATTTTATTAGCGATTGTGTTAAGC
GTTTCTACCTTTATCGCACA

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGAGFSTELLKEYVDTFVFVALGIASFLALWFVIERIIFYSKVNLKAYTDVDALNLDLTKNLTILYVIYSNAPYVGLLGT
VLGVMVTFYDMGISEGMDAKTIMVGLSLALKATALGLAVAIPTLIAYNGLLRKSDVLSEKFRIMSK

Sequences:

>Translated_146_residues
MGAGFSTELLKEYVDTFVFVALGIASFLALWFVIERIIFYSKVNLKAYTDVDALNLDLTKNLTILYVIYSNAPYVGLLGT
VLGVMVTFYDMGISEGMDAKTIMVGLSLALKATALGLAVAIPTLIAYNGLLRKSDVLSEKFRIMSK
>Mature_145_residues
GAGFSTELLKEYVDTFVFVALGIASFLALWFVIERIIFYSKVNLKAYTDVDALNLDLTKNLTILYVIYSNAPYVGLLGTV
LGVMVTFYDMGISEGMDAKTIMVGLSLALKATALGLAVAIPTLIAYNGLLRKSDVLSEKFRIMSK

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014172 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 15965; Mature: 15834

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGFSTELLKEYVDTFVFVALGIASFLALWFVIERIIFYSKVNLKAYTDVDALNLDLTK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECEECC
NLTILYVIYSNAPYVGLLGTVLGVMVTFYDMGISEGMDAKTIMVGLSLALKATALGLAVA
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IPTLIAYNGLLRKSDVLSEKFRIMSK
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAGFSTELLKEYVDTFVFVALGIASFLALWFVIERIIFYSKVNLKAYTDVDALNLDLTK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECEECC
NLTILYVIYSNAPYVGLLGTVLGVMVTFYDMGISEGMDAKTIMVGLSLALKATALGLAVA
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IPTLIAYNGLLRKSDVLSEKFRIMSK
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]