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The map label for this gene is oppB fragment 1

Identifier: 109946859

GI number: 109946859

Start: 201336

End: 201455

Strand: Direct

Name: oppB fragment 1

Synonym: Hac_0239

Alternate gene names: NA

Gene position: 201336-201455 (Clockwise)

Preceding gene: 109946858

Following gene: 109946860

Centisome position: 12.96

GC content: 45.0

Gene sequence:

>120_bases
TTGATCCAATCTGCCCCCAAAGGACCCATTGATCAGATGATGGATAAAATCAATGACACGCAGTCCAAAGAAACCCAAGA
CCTCGTTAAAGATCGTGTGTATAGGGGTCTCAATGGCTAG

Upstream 100 bases:

>100_bases
TCAAAAAAGAAAGGGGTCTTTAAATGATTGCTTGCATTCTTAAACGCTTGCTTTTGATTATTTCTACTTTATTAGCCATC
ATGACGATTAATTTTTTTTT

Downstream 100 bases:

>100_bases
AGAGCGATTTAGTAGAGAGCTTGAAAAAGCTTTATGGTTTTGATAAGCTCATAGGAGAGCGCTACTTGCTCATGCTTAAA
AAATACCTGCAATTTGATTT

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MIQSAPKGPIDQMMDKINDTQSKETQDLVKDRVYRGLNG

Sequences:

>Translated_39_residues
MIQSAPKGPIDQMMDKINDTQSKETQDLVKDRVYRGLNG
>Mature_39_residues
MIQSAPKGPIDQMMDKINDTQSKETQDLVKDRVYRGLNG

Specific function: Unknown

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4422; Mature: 4422

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSAPKGPIDQMMDKINDTQSKETQDLVKDRVYRGLNG
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIQSAPKGPIDQMMDKINDTQSKETQDLVKDRVYRGLNG
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA