| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109946806
GI number: 109946806
Start: 154899
End: 155105
Strand: Reverse
Name: fragment 2
Synonym: Hac_0183
Alternate gene names: NA
Gene position: 155105-154899 (Counterclockwise)
Preceding gene: 109946807
Following gene: 109946805
Centisome position: 9.98
GC content: 28.5
Gene sequence:
>207_bases TTGTTTGTGCCTAGCTACCAAACAAAGCCCATTAAAGCCGTTGAATTACAAAGCGGTTCGTTTAAAATGAGCGGCAAAAA TTTTAAGGATTTAAAAGAGTATCTTAATTTTATGAGTGAAAAACATTTTATTTTAAAGCATGAATTTTATGACTCTAAAA ATTATGTGCTGTTAAAAGAAATAATACAAAAAAGCGCTTTAAGATAG
Upstream 100 bases:
>100_bases CTGAAAACGAAAGCGTTAGGGCGTCCTTGATATTAAAGAAAAAAGCTCCGAAGCTTTATGGTGTGAAGTAGAATTAGAAA AAACGCCCATAGAGCATGTT
Downstream 100 bases:
>100_bases AGTTAAACTAGCATTATAAACATTTAGATGATTTGATTTCTAGGCTTAAAACCAGGCTATACCTTAATCAAAAAGTGCCT GAAGATGAGTTTAACGCCCT
Product: restriction enzyme fragment 2
Products: NA
Alternate protein names: Type III R-M System Restriction
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MFVPSYQTKPIKAVELQSGSFKMSGKNFKDLKEYLNFMSEKHFILKHEFYDSKNYVLLKEIIQKSALR
Sequences:
>Translated_68_residues MFVPSYQTKPIKAVELQSGSFKMSGKNFKDLKEYLNFMSEKHFILKHEFYDSKNYVLLKEIIQKSALR >Mature_68_residues MFVPSYQTKPIKAVELQSGSFKMSGKNFKDLKEYLNFMSEKHFILKHEFYDSKNYVLLKEIIQKSALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8094; Mature: 8094
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVPSYQTKPIKAVELQSGSFKMSGKNFKDLKEYLNFMSEKHFILKHEFYDSKNYVLLKE CCCCCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHH IIQKSALR HHHHHCCC >Mature Secondary Structure MFVPSYQTKPIKAVELQSGSFKMSGKNFKDLKEYLNFMSEKHFILKHEFYDSKNYVLLKE CCCCCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHH IIQKSALR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA