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The map label for this gene is yrbH [C]

Identifier: 109946740

GI number: 109946740

Start: 105877

End: 106866

Strand: Direct

Name: yrbH [C]

Synonym: Hac_0115

Alternate gene names: 109946740

Gene position: 105877-106866 (Clockwise)

Preceding gene: 109946739

Following gene: 109946741

Centisome position: 6.81

GC content: 41.52

Gene sequence:

>990_bases
ATGTCCAATCTTTTTGATTGTAACGCTACCGCTGTGCAAGTCTTGCAAGATGAAGCAAGTGCGCTTTTAGAAAGCGTTCA
GCAATTCCAAAAACCTAACGATTTAGAAGCGATTGTCAAGCTTATTTTAGAGAGCCAAGAAAAAGGGGGTAAGCTTGTGA
TCGTGGGCGTGGGTAAGAGTGCTTTAGTGGCACAAAAAATCAGTGCTTCCATGCTAAGCACCGGTAACAGGAGTGCGTTT
TTACACCCCACAGAAGCCATGCATGGGGATTTAGGCATGGTGGAAAAAAACGATGTGATTTTAATGATTAGCTATGGGGG
CGAGTCTTTAGAATTATTGAATTTAGTGAGCCATTTAAAACGCTTGAGCCATAAAATCATCACTTTTACCAAAAGCCCTA
ATAGCTCGCTCTCTAAACTTGGCGATTATTATTTAAGCTTAAAGATTAAAAAAGAATCTTGTCCTATTAACACCGCCCCA
ACGACTTCCACCACCCTAACTTTAGCCTTAGGCGATGTTTTAATGGCATGTTTGATGCGGGCGAAAAACTTTAGCCAAGA
AGATTTTGCCTCCTTTCATCCGGGTGGGCTTTTGGGTAAAAAACTTTTTGTCAAGGTTAAAGATTTATTGCAAACCACCA
ACCTCCCCTTAATCCCTCCTAACACAAGCTTTAAAGACGCACTCATAGAAATGAGTGAAAAACGCCTAGGCAGCGCGATT
TTAGTGAATGCTAATAACGAGCTTGTGGGGGTGTTGAGCGATGGCGATGTTCGCAGGGCGTTACTAAAAGGGGTTAGTTT
GGAGAGCGAAGTGAGGGATTTTGCCACTTTAAAACCTAAAAGCTTTAAGAATTTAGACGCCCTTCTTTTAGAAGCGTTAG
AATTTTTAGAGCGTCATAAGATCCAGCTTTTAGTGTGCGTGGATTCTCACAATAAAGTTTTAGGGGTCTTGCACTTGCAC
CAACTTTTAGAATTAGGGCTTAAAGCATGA

Upstream 100 bases:

>100_bases
GAGATTTTGAATAACCCTAAAAAATTAGAAGATCACACTCGTAATTTTATGAGAAAAGCGCTCTTTAAAAAGTTTAGAAA
ATACCCAGCTATCATTTGTC

Downstream 100 bases:

>100_bases
AACCTAGCGTTTATGATTTCACTTTAAAGGAATTGAGCCAACTTTTAAAGCCAAGCTTTAGGGCTAAACAACTTTATTTG
TGGCTTTATGCAAAGTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSNLFDCNATAVQVLQDEASALLESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKSALVAQKISASMLSTGNRSAF
LHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKESCPINTAP
TTSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPNTSFKDALIEMSEKRLGSAI
LVNANNELVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDALLLEALEFLERHKIQLLVCVDSHNKVLGVLHLH
QLLELGLKA

Sequences:

>Translated_329_residues
MSNLFDCNATAVQVLQDEASALLESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKSALVAQKISASMLSTGNRSAF
LHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKESCPINTAP
TTSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPNTSFKDALIEMSEKRLGSAI
LVNANNELVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDALLLEALEFLERHKIQLLVCVDSHNKVLGVLHLH
QLLELGLKA
>Mature_328_residues
SNLFDCNATAVQVLQDEASALLESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKSALVAQKISASMLSTGNRSAFL
HPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKESCPINTAPT
TSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPNTSFKDALIEMSEKRLGSAIL
VNANNELVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDALLLEALEFLERHKIQLLVCVDSHNKVLGVLHLHQ
LLELGLKA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=327, Percent_Identity=39.1437308868502, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI87082151, Length=279, Percent_Identity=36.5591397849462, Blast_Score=197, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35868; Mature: 35737

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLFDCNATAVQVLQDEASALLESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCH
ALVAQKISASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLK
HHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHH
RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKESCPINTAPTTSTTLTLALGDVLMACLMR
HHHHHEEEEECCCCHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPNTSFKDALIEMSEKRLGSAI
HCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEE
LVNANNELVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDALLLEALEFLERHK
EEECCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
IQLLVCVDSHNKVLGVLHLHQLLELGLKA
EEEEEEECCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNLFDCNATAVQVLQDEASALLESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCH
ALVAQKISASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLK
HHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHH
RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKESCPINTAPTTSTTLTLALGDVLMACLMR
HHHHHEEEEECCCCHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPNTSFKDALIEMSEKRLGSAI
HCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEE
LVNANNELVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDALLLEALEFLERHK
EEECCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
IQLLVCVDSHNKVLGVLHLHQLLELGLKA
EEEEEEECCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]