| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is mreC
Identifier: 109946699
GI number: 109946699
Start: 64516
End: 65262
Strand: Direct
Name: mreC
Synonym: Hac_0066
Alternate gene names: NA
Gene position: 64516-65262 (Clockwise)
Preceding gene: 109946698
Following gene: 109946700
Centisome position: 4.15
GC content: 36.68
Gene sequence:
>747_bases ATGCACTTTTATTCCAAATTCCTTTGGCTTTTAGGGATTTTTCTTATTTTTTATTTTTCAGATATTAAAGGTGGCTCTTC TTATATCAGCGACAAGCTTAAAGACGCCTTGATGAGTGCGAAAAATAGCTTATTAGACAACATTCAAGCTTATTTTTTTC AAGCCAAAAACATTAAAGAATTTCAAAAAGAACGCTTGGTTTTAGAAGCTTTAAAACTAGAAAACGCTGATTTGAAAGAG CGCTTAAAGGGCGTGTATCCTTTAGAAAAGCCAAAAATGATTTATACCCCCACCTTTATGACTTCCTTTATTAGTTTAGA AGACACGCACAGCGTTTCTCTCAACCCTATCATGAATTTAGAAGAAAATAAGATTTATGGTCTTGTTTCTCATAATCAAG CCATAGGTATTGCGGTGCTAGAAAAAGGGCGTTTGAATGGGTTTTTGAACGCCCACAAGCGGTGCGCTTATAGCGTGATG ATAGGCAAAAATCAAGCGTTAGGTTTTATAGGGACTAATTTCAAGCAAGAGTTAGTCGTGGATTTTATTGTCCCAAGCGC TGAAATTAACATAGGTGATCAAGTGCTAACAAGCGGATTAGATGGGATTTTTGGAGCGGGGGTGTTTGTGGGCGAAGTCT CAAGCATTGAATATCATTACACTTATAAAAGCGCGGTGTTAAAAAACGCTTTTTTAAGCAACGCTAAACTTTTAAGGCAT GTGTTTTTGAGCGATGTCAAAAACTAG
Upstream 100 bases:
>100_bases TATGTGGGCGAAGAGCCTTTGTTGGCGGTAGCTAAAGGCACGGGAGAAGCTATACAAGATTTGGATTTACTCAGCCGTGT GGGTTTTAGTGAATAATATT
Downstream 100 bases:
>100_bases TATGGATGGTGGATTTAAGAAATTTTAATGGATGGAGTTGTTTGATGATTTTAGATTCTAAATTTTTTGTGTTCATTCTT TTTAATGTGCTTTCAGCATG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Periplasmic Protein; Rod Shape Determining Protein MreC; Rod Shape-Determining Protein Mrec; Hemagglutinin/Hemolysin-Related Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MHFYSKFLWLLGIFLIFYFSDIKGGSSYISDKLKDALMSAKNSLLDNIQAYFFQAKNIKEFQKERLVLEALKLENADLKE RLKGVYPLEKPKMIYTPTFMTSFISLEDTHSVSLNPIMNLEENKIYGLVSHNQAIGIAVLEKGRLNGFLNAHKRCAYSVM IGKNQALGFIGTNFKQELVVDFIVPSAEINIGDQVLTSGLDGIFGAGVFVGEVSSIEYHYTYKSAVLKNAFLSNAKLLRH VFLSDVKN
Sequences:
>Translated_248_residues MHFYSKFLWLLGIFLIFYFSDIKGGSSYISDKLKDALMSAKNSLLDNIQAYFFQAKNIKEFQKERLVLEALKLENADLKE RLKGVYPLEKPKMIYTPTFMTSFISLEDTHSVSLNPIMNLEENKIYGLVSHNQAIGIAVLEKGRLNGFLNAHKRCAYSVM IGKNQALGFIGTNFKQELVVDFIVPSAEINIGDQVLTSGLDGIFGAGVFVGEVSSIEYHYTYKSAVLKNAFLSNAKLLRH VFLSDVKN >Mature_248_residues MHFYSKFLWLLGIFLIFYFSDIKGGSSYISDKLKDALMSAKNSLLDNIQAYFFQAKNIKEFQKERLVLEALKLENADLKE RLKGVYPLEKPKMIYTPTFMTSFISLEDTHSVSLNPIMNLEENKIYGLVSHNQAIGIAVLEKGRLNGFLNAHKRCAYSVM IGKNQALGFIGTNFKQELVVDFIVPSAEINIGDQVLTSGLDGIFGAGVFVGEVSSIEYHYTYKSAVLKNAFLSNAKLLRH VFLSDVKN
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27930; Mature: 27930
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFYSKFLWLLGIFLIFYFSDIKGGSSYISDKLKDALMSAKNSLLDNIQAYFFQAKNIKE CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FQKERLVLEALKLENADLKERLKGVYPLEKPKMIYTPTFMTSFISLEDTHSVSLNPIMNL HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCEECCCCCCC EENKIYGLVSHNQAIGIAVLEKGRLNGFLNAHKRCAYSVMIGKNQALGFIGTNFKQELVV CCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHH DFIVPSAEINIGDQVLTSGLDGIFGAGVFVGEVSSIEYHYTYKSAVLKNAFLSNAKLLRH HHCCCCCCCCCCHHHHHHCCCHHHHCHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHH VFLSDVKN HHHHHCCC >Mature Secondary Structure MHFYSKFLWLLGIFLIFYFSDIKGGSSYISDKLKDALMSAKNSLLDNIQAYFFQAKNIKE CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FQKERLVLEALKLENADLKERLKGVYPLEKPKMIYTPTFMTSFISLEDTHSVSLNPIMNL HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCEECCCCCCC EENKIYGLVSHNQAIGIAVLEKGRLNGFLNAHKRCAYSVMIGKNQALGFIGTNFKQELVV CCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHH DFIVPSAEINIGDQVLTSGLDGIFGAGVFVGEVSSIEYHYTYKSAVLKNAFLSNAKLLRH HHCCCCCCCCCCHHHHHHCCCHHHHCHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHH VFLSDVKN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA